RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 MEI1Q5TIA1 1274 aa20.43■□□□□ 0.86
USP39-202ENST00000409025 SAPCD2Q86UD0 394 aa20.43■□□□□ 0.86
USP39-202ENST00000409025 CTNNBL1Q8WYA6 563 aaPredicted RBP20.43■□□□□ 0.86
USP39-202ENST00000409025 ZNF668Q96K58 619 aaPredicted RBP20.43■□□□□ 0.86
USP39-202ENST00000409025 FAM84AQ96KN4 292 aa20.43■□□□□ 0.86
USP39-202ENST00000409025 PDCL3Q9H2J4 239 aa20.43■□□□□ 0.86
USP39-202ENST00000409025 RRP9O43818 475 aaKnown RBP20.42■□□□□ 0.86
USP39-202ENST00000409025 FAM189A1O60320 539 aa20.42■□□□□ 0.86
USP39-202ENST00000409025 ECM2O94769 699 aaPredicted RBP20.42■□□□□ 0.86
USP39-202ENST00000409025 FTCDO95954 541 aa20.42■□□□□ 0.86
USP39-202ENST00000409025 MBTD1Q05BQ5 628 aa20.42■□□□□ 0.86
USP39-202ENST00000409025 SURF1Q15526 300 aa20.42■□□□□ 0.86
USP39-202ENST00000409025 ATF7IP2Q5U623 682 aa20.42■□□□□ 0.86
USP39-202ENST00000409025 MPZL3Q6UWV2 235 aa20.42■□□□□ 0.86
USP39-202ENST00000409025 CREG2Q8IUH2 290 aa20.42■□□□□ 0.86
USP39-202ENST00000409025 LINC01465Q8N7H1 131 aa20.42■□□□□ 0.86
USP39-202ENST00000409025 EPS8L1Q8TE68 723 aa20.42■□□□□ 0.86
USP39-202ENST00000409025 NOCTQ9UK39 431 aaKnown RBP20.42■□□□□ 0.86
USP39-202ENST00000409025 NCANO14594 1321 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 ANKRD62A6NC57 917 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 ABLIM1O14639 778 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 PROZP22891 400 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 TNFSF9P41273 254 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 INHBEP58166 350 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 IRF5Q13568 498 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 MTHFD1LQ6UB35 978 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 NOP9Q86U38 636 aaKnown RBP20.41■□□□□ 0.86
USP39-202ENST00000409025 TPCN2Q8NHX9 752 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 COG1Q8WTW3 980 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 PARD6BQ9BYG5 372 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 PRMT7Q9NVM4 692 aaPredicted RBP20.41■□□□□ 0.86
USP39-202ENST00000409025 AKT3Q9Y243 479 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 PHACTR2O75167 634 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 VNN1O95497 513 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 PDE6CP51160 858 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 PPFIA1Q13136 1202 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 SLC47A2Q86VL8 602 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 PALB2Q86YC2 1186 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 IFNL1Q8IU54 200 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 WDR49Q8IV35 697 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 RFFLQ8WZ73 363 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 ELMO3Q96BJ8 720 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 PTPRHQ9HD43 1115 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 TAS2R14Q9NYV8 317 aa20.41■□□□□ 0.86
USP39-202ENST00000409025 SLC10A3P09131 477 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 KRT5P13647 590 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 CYP11B1P15538 503 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 ABCB4P21439 1286 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 CLCN6P51797 869 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 ZNF568Q3ZCX4 644 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 CCDC181Q5TID7 509 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 C17orf99Q6UX52 265 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 SYCE1Q8N0S2 351 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 NOA1Q8NC60 698 aaKnown RBP20.4■□□□□ 0.86
USP39-202ENST00000409025 MSANTD4Q8NCY6 345 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 PSMB7Q99436 277 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 IFT122Q9HBG6 1241 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 CPSF3Q9UKF6 684 aaKnown RBP20.4■□□□□ 0.86
USP39-202ENST00000409025 TNFSF13BQ9Y275 285 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 ZSWIM8A7E2V4 1837 aa20.4■□□□□ 0.86
USP39-202ENST00000409025 PDE2AO00408 941 aaPredicted RBP20.39■□□□□ 0.86
USP39-202ENST00000409025 B4GALT5O43286 388 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 HOXC6P09630 235 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 CHRNB2P17787 502 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 CXCR5P32302 372 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 PAFAH1B1P43034 410 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 GRIK4Q16099 956 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 FAM187BQ17R55 369 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 TAF3Q5VWG9 929 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 IFNLR1Q8IU57 520 aaPredicted RBP20.39■□□□□ 0.86
USP39-202ENST00000409025 LRRC57Q8N9N7 239 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 OR5B17Q8NGF7 314 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 DHX38Q92620 1227 aaKnown RBP20.39■□□□□ 0.86
USP39-202ENST00000409025 ISCUQ9H1K1 167 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 MINDY3Q9H8M7 445 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 ANKZF1Q9H8Y5 726 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 RNF14Q9UBS8 474 aa20.39■□□□□ 0.86
USP39-202ENST00000409025 A0A087WZ62 844 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 ADCY6O43306 1168 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 RTN2O75298 545 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 GZMAP12544 262 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 CDR2Q01850 454 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 PRAMEF19Q5SWL8 479 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 ZNF572Q7Z3I7 529 aaPredicted RBP20.39■□□□□ 0.85
USP39-202ENST00000409025 SLC35G2Q8TBE7 412 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 TAF4BQ92750 862 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 FAM212AQ96EL1 285 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 FDXACB1Q9BRP7 624 aaPredicted RBP20.39■□□□□ 0.85
USP39-202ENST00000409025 ZFYVE28Q9HCC9 887 aa20.39■□□□□ 0.85
USP39-202ENST00000409025 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
USP39-202ENST00000409025 DYNC1LI2O43237 492 aaPredicted RBP20.38■□□□□ 0.85
USP39-202ENST00000409025 ZEB2O60315 1214 aa20.38■□□□□ 0.85
USP39-202ENST00000409025 FTLP02792 175 aaPredicted RBP20.38■□□□□ 0.85
USP39-202ENST00000409025 RHOXF2BP0C7M4 288 aa20.38■□□□□ 0.85
USP39-202ENST00000409025 RPS6KA1Q15418 735 aa20.38■□□□□ 0.85
USP39-202ENST00000409025 THNSL1Q8IYQ7 743 aa20.38■□□□□ 0.85
USP39-202ENST00000409025 PCDHB18PQ96TA0 734 aa20.38■□□□□ 0.85
USP39-202ENST00000409025 RHOXF2Q9BQY4 288 aa20.38■□□□□ 0.85
USP39-202ENST00000409025 THAP2Q9H0W7 228 aa20.38■□□□□ 0.85
USP39-202ENST00000409025 VTNP04004 478 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms