RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PNMA6AP0CW24 399 aaPredicted RBP12.7□□□□□ -0.38
SMCR8-201ENST00000406438 LBHD1Q9BQE6 289 aaPredicted RBP12.7□□□□□ -0.38
SMCR8-201ENST00000406438 EIF2AK1Q9BQI3 630 aaKnown RBP12.7□□□□□ -0.38
SMCR8-201ENST00000406438 FAM129AQ9BZQ8 928 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 MLXIPLQ9NP71 852 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 DUX4Q9UBX2 424 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 ZNF335Q9H4Z2 1342 aaPredicted RBP12.7□□□□□ -0.38
SMCR8-201ENST00000406438 P4HBP07237 508 aaKnown RBP12.7□□□□□ -0.38
SMCR8-201ENST00000406438 APRTP07741 180 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 COG1Q8WTW3 980 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 NDEL1Q9GZM8 345 aa12.7□□□□□ -0.38
SMCR8-201ENST00000406438 CAPZA2P47755 286 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 EIF3EP60228 445 aaKnown RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 PSMC5P62195 406 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 TADA1Q96BN2 335 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 PLEKHF1Q96S99 279 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 EHD2Q9NZN4 543 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 MPP6Q9NZW5 540 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 LSM7Q9UK45 103 aaKnown RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 POTECB2RU33 542 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 YWHABP31946 246 aaKnown RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 S100A5P33763 92 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 KCNQ4P56696 695 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 STKLD1Q8NE28 680 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 BARHL2Q9NY43 387 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 C6orf203Q9P0P8 240 aaPredicted RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 CYP2E1P05181 493 aaPredicted RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 PMS1P54277 932 aaKnown RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 ENAHQ8N8S7 591 aaPredicted RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 AGR3Q8TD06 166 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 SPATA16Q9BXB7 569 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 MUC3BQ9H195 1237 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L15C9J2P7 530 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 WDR47O94967 919 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 ASMTLO95671 621 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 MOCS2O96007 188 aaPredicted RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 BRAFP15056 766 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 AKT1P31749 480 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 NCALDP61601 193 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 MRPS15P82914 257 aaKnown RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 USP17L6PQ6QN14 398 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 FAM180AQ6UWF9 173 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 SYDE1Q6ZW31 735 aaPredicted RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 ATP11BQ9Y2G3 1177 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 HIST1H2AGP0C0S8 130 aaPredicted RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 TCF3P15923 654 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 HIST1H2ADP20671 130 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 HIC1Q14526 733 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 KIRREL3Q8IZU9 778 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 OR6J1Q8NGC5 347 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 HIST1H2AHQ96KK5 128 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 MED15Q96RN5 788 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 HIST1H2AJQ99878 128 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 H2AFJQ9BTM1 129 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 GLI2P10070 1586 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 RTN2O75298 545 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 CYP2C19P33261 490 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 ACAD9Q9H845 621 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 PSD3Q9NYI0 1048 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 MEFVO15553 781 aaPredicted RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 KDM1AO60341 852 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 SSTR3P32745 418 aaPredicted RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 EFNA5P52803 228 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 P3H1Q32P28 736 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 SAAL1Q96ER3 474 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 KATNAL1Q9BW62 490 aa12.69□□□□□ -0.38
SMCR8-201ENST00000406438 H2AFY2Q9P0M6 372 aaPredicted RBP12.69□□□□□ -0.38
SMCR8-201ENST00000406438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.68□□□□□ -0.38
SMCR8-201ENST00000406438 WDR19Q8NEZ3 1342 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 NDUFS3O75489 264 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 FDX1P10109 184 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 VCAM1P19320 739 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 SLC1A1P43005 524 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 GPSM2P81274 684 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 CUL4AQ13619 759 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 FRMD5Q7Z6J6 570 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 ATPAF2Q8N5M1 289 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 AIFM3Q96NN9 605 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 RNF146Q9NTX7 359 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 FAM187AA6NFU0 413 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 LRRIQ3A6PVS8 624 aaPredicted RBP12.68□□□□□ -0.38
SMCR8-201ENST00000406438 PLD3Q8IV08 490 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 APPL2Q8NEU8 664 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 HSPA9P38646 679 aaKnown RBP12.68□□□□□ -0.38
SMCR8-201ENST00000406438 CACNB3P54284 484 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 MTHFD1LQ6UB35 978 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 TIPINQ9BVW5 301 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 EMSYQ7Z589 1322 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 ATP9BO43861 1147 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 USP11P51784 963 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 HPCAP84074 193 aa12.68□□□□□ -0.38
SMCR8-201ENST00000406438 PI16Q6UXB8 463 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms