RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CNOT7Q9UIV1 285 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 R3HDM2Q9Y2K5 976 aaKnown RBP10.57□□□□□ -0.72
MSH2-202ENST00000406134 GGPS1O95749 300 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 CCDC172P0C7W6 258 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 DLATP10515 647 aaKnown RBP10.56□□□□□ -0.72
MSH2-202ENST00000406134 KCNA2P16389 499 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 LACTB2Q53H82 288 aaPredicted RBP10.56□□□□□ -0.72
MSH2-202ENST00000406134 CRELD2Q6UXH1 353 aaPredicted RBP10.56□□□□□ -0.72
MSH2-202ENST00000406134 PIGWQ7Z7B1 504 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 FMNL3Q8IVF7 1028 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 PPM1KQ8N3J5 372 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 DDX27Q96GQ7 796 aaKnown RBP10.56□□□□□ -0.72
MSH2-202ENST00000406134 CEP89Q96ST8 783 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 HOMER2Q9NSB8 354 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 WDR46O15213 610 aaKnown RBP10.56□□□□□ -0.72
MSH2-202ENST00000406134 CETPP11597 493 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 ACO1P21399 889 aaKnown RBP10.56□□□□□ -0.72
MSH2-202ENST00000406134 PTP4A2Q12974 167 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 TMEM63BQ5T3F8 832 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 ACAD10Q6JQN1 1059 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 ZNF526Q8TF50 670 aaPredicted RBP10.56□□□□□ -0.72
MSH2-202ENST00000406134 POMGNT1Q8WZA1 660 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 NAP1L3Q99457 506 aaPredicted RBP10.56□□□□□ -0.72
MSH2-202ENST00000406134 KIAA1683Q9H0B3 1180 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 EURLQ9NYK6 297 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 ZNF541Q9H0D2 1346 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 CLDN3O15551 220 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 VNN1O95497 513 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 PSMC5P62195 406 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 PPP2R5EQ16537 467 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 C2CD6Q53TS8 623 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 KRT39Q6A163 491 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 MFSD5Q6N075 450 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 SAMD3Q8N6K7 520 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 TIPINQ9BVW5 301 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 RAB20Q9NX57 234 aa10.56□□□□□ -0.72
MSH2-202ENST00000406134 ASNSP08243 561 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 LLGL1Q15334 1064 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 MON1BQ7L1V2 547 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 EXOC3L1Q86VI1 746 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 ARFGAP2Q8N6H7 521 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 TMC2Q8TDI7 906 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 ATG4AQ8WYN0 398 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 ZNF653Q96CK0 615 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 PWWP2AQ96N64 755 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 ANKEF1Q9NU02 776 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 TBC1D22BQ9NU19 505 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 PTPN22Q9Y2R2 807 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 DENND3A2RUS2 1198 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 GOLGA6L10A6NI86 522 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 CYP1A1P04798 512 aaPredicted RBP10.55□□□□□ -0.72
MSH2-202ENST00000406134 RARGP13631 454 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 ATP4AP20648 1035 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 MPP2Q14168 576 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 CCDC142Q17RM4 750 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 FAM102BQ5T8I3 360 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 VSTM1Q6UX27 236 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 RNF207Q6ZRF8 634 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 CPXCR1Q8N123 301 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 UBL4BQ8N7F7 174 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 SUPT20HQ8NEM7 779 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 MORC4Q8TE76 937 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 VTI1AQ96AJ9 217 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 CCDC127Q96BQ5 260 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 APOBEC3GQ9HC16 384 aaKnown RBP10.55□□□□□ -0.72
MSH2-202ENST00000406134 ARHGAP28Q9P2N2 729 aa10.55□□□□□ -0.72
MSH2-202ENST00000406134 POLR2AP24928 1970 aaKnown RBP10.54□□□□□ -0.72
MSH2-202ENST00000406134 HSPA6P17066 643 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 PLCB4Q15147 1175 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 CYFIP1Q7L576 1253 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 MCOLN2Q8IZK6 566 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 SPIRE2Q8WWL2 714 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 CDC42EP4Q9H3Q1 356 aaKnown RBP10.54□□□□□ -0.72
MSH2-202ENST00000406134 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.54□□□□□ -0.72
MSH2-202ENST00000406134 UVRAGQ9P2Y5 699 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 CTNNAL1Q9UBT7 734 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 SSC5DA1L4H1 1573 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 GOLGA6L10A0A0M3HER8 536 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 PODXLO00592 558 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 DSG3P32926 999 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 ADCY2Q08462 1091 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 CNGA2Q16280 664 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 ZBTB41Q5SVQ8 909 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 TDRD10Q5VZ19 366 aaKnown RBP10.54□□□□□ -0.72
MSH2-202ENST00000406134 TRMT1LQ7Z2T5 733 aaKnown RBP10.54□□□□□ -0.72
MSH2-202ENST00000406134 OTUD6BQ8N6M0 293 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 FBXL13Q8NEE6 735 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 C1orf54Q8WWF1 131 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 C4BPAP04003 597 aaKnown RBP10.54□□□□□ -0.72
MSH2-202ENST00000406134 USP8P40818 1118 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 MFAP3P55082 362 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 SP2Q02086 613 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 GCNT1Q02742 428 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 CGB2Q6NT52 195 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 CCDC60Q8IWA6 550 aaPredicted RBP10.54□□□□□ -0.72
MSH2-202ENST00000406134 ANKLE1Q8NAG6 615 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 UHMK1Q8TAS1 419 aaKnown RBP10.54□□□□□ -0.72
MSH2-202ENST00000406134 KCNN1Q92952 543 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 HVCN1Q96D96 273 aa10.54□□□□□ -0.72
MSH2-202ENST00000406134 MOV10L1Q9BXT6 1211 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms