RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 KIAA1683Q9H0B3 1180 aa21.25■□□□□ 0.99
CCDC47-202ENST00000403162 VAMP7P51809 220 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 SIX1Q15475 284 aaPredicted RBP21.24■□□□□ 0.99
CCDC47-202ENST00000403162 CNGA2Q16280 664 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 ZNF568Q3ZCX4 644 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 B3GNT9Q6UX72 402 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 C12orf56Q8IXR9 622 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 DAW1Q8N136 415 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 ZNF280CQ8ND82 737 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 UNC45AQ9H3U1 944 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 USP20Q9Y2K6 914 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 PPP3CAQ08209 521 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 ALCAMQ13740 583 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 TRMT10CQ7L0Y3 403 aaKnown RBP21.24■□□□□ 0.99
CCDC47-202ENST00000403162 CCDC105Q8IYK2 499 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 PCDHB18PQ96TA0 734 aa21.24■□□□□ 0.99
CCDC47-202ENST00000403162 NOCTQ9UK39 431 aaKnown RBP21.24■□□□□ 0.99
CCDC47-202ENST00000403162 ARHGEF35A5YM69 484 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 CFBP00751 764 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 MAPTP10636 758 aaKnown RBP21.23■□□□□ 0.99
CCDC47-202ENST00000403162 CHRNB2P17787 502 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 CEP55Q53EZ4 464 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 TRPM8Q7Z2W7 1104 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 ANKRD13AQ8IZ07 590 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 GIMAP7Q8NHV1 300 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 EPS8L1Q8TE68 723 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 SCLT1Q96NL6 688 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 ELAC2Q9BQ52 826 aaKnown RBP21.23■□□□□ 0.99
CCDC47-202ENST00000403162 LXNQ9BS40 222 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 TMEM206Q9H813 350 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 TCRBV7S2A1N4TA0A589 114 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 ANKRD63C9JTQ0 380 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 K7ENM7 598 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 PMM2O15305 246 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 CYP1A2P05177 515 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 POLR2MP0CAP2 368 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 ZNF746Q6NUN9 644 aaPredicted RBP21.23■□□□□ 0.99
CCDC47-202ENST00000403162 SLCO2A1Q92959 643 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 CLMNQ96JQ2 1002 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 EHMT1Q9H9B1 1298 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 ELP3Q9H9T3 547 aa21.23■□□□□ 0.99
CCDC47-202ENST00000403162 CFAP73A6NFT4 308 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 VIMP08670 466 aaKnown RBP21.22■□□□□ 0.99
CCDC47-202ENST00000403162 RARAP10276 462 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 EZRP15311 586 aaKnown RBP21.22■□□□□ 0.99
CCDC47-202ENST00000403162 SLCO1A2P46721 670 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 BACE1P56817 501 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 DGKZQ13574 1117 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 C1orf220Q5T0J3 134 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 CEP57Q86XR8 500 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 FAM71AQ8IYT1 594 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 ZNF577Q9BSK1 485 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 LRRC19Q9H756 370 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 HOMER3Q9NSC5 361 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 OTOFQ9HC10 1997 aa21.22■□□□□ 0.99
CCDC47-202ENST00000403162 MAPK13O15264 365 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 SGPL1O95470 568 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 ATP6V1G2O95670 118 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 OAS1P00973 400 aaKnown RBP21.21■□□□□ 0.99
CCDC47-202ENST00000403162 PDE6CP51160 858 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 STAT2P52630 851 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 PPP1R7Q15435 360 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 HIBCHQ6NVY1 386 aaPredicted RBP21.21■□□□□ 0.99
CCDC47-202ENST00000403162 NOP9Q86U38 636 aaKnown RBP21.21■□□□□ 0.99
CCDC47-202ENST00000403162 CCDC63Q8NA47 563 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 UHMK1Q8TAS1 419 aaKnown RBP21.21■□□□□ 0.99
CCDC47-202ENST00000403162 ZNF564Q8TBZ8 553 aaPredicted RBP21.21■□□□□ 0.99
CCDC47-202ENST00000403162 TEKT3Q9BXF9 490 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 SPOPO43791 374 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 ECEL1O95672 775 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 GCLMP48507 274 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 EXOC3L1Q86VI1 746 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 CNKSR2Q8WXI2 1034 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 LPAR1Q92633 364 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 GPBP1L1Q9HC44 474 aaPredicted RBP21.21■□□□□ 0.99
CCDC47-202ENST00000403162 WHRNQ9P202 907 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 PTPN22Q9Y2R2 807 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 PAPPA2Q9BXP8 1791 aa21.21■□□□□ 0.99
CCDC47-202ENST00000403162 SNX3O60493 162 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 RWDD2BP57060 319 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 CALCOCO2Q13137 446 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 RIPK1Q13546 671 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 ACCSQ96QU6 501 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 NUP85Q9BW27 656 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 PCIF1Q9H4Z3 704 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 LARSQ9P2J5 1176 aaKnown RBP21.2■□□□□ 0.98
CCDC47-202ENST00000403162 UVRAGQ9P2Y5 699 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 DBR1Q9UK59 544 aaKnown RBP21.2■□□□□ 0.98
CCDC47-202ENST00000403162 GTF3C4Q9UKN8 822 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 AFG3L2Q9Y4W6 797 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 ATMINO43313 823 aaPredicted RBP21.2■□□□□ 0.98
CCDC47-202ENST00000403162 ARP10275 920 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 ELF1P32519 619 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 RNF207Q6ZRF8 634 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 SERPINB12Q96P63 405 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 NOD2Q9HC29 1040 aa21.2■□□□□ 0.98
CCDC47-202ENST00000403162 CHORDC1Q9UHD1 332 aaPredicted RBP21.2■□□□□ 0.98
CCDC47-202ENST00000403162 CELF2O95319 508 aaKnown RBP21.19■□□□□ 0.98
CCDC47-202ENST00000403162 IFNAR2P48551 515 aa21.19■□□□□ 0.98
CCDC47-202ENST00000403162 HMGCS2P54868 508 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms