RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ANO9A1A5B4 782 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 ARL5CA6NH57 179 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 BMPR1AP36894 532 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 PNOCQ13519 176 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 FOXD4L6Q3SYB3 417 aaPredicted RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 SPATA1Q5VX52 437 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 FOXD4L3Q6VB84 417 aaPredicted RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 LIMS2Q7Z4I7 341 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 FILIP1Q7Z7B0 1213 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 DDX53Q86TM3 631 aaKnown RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 ABI1Q8IZP0 508 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 SLC39A11Q8N1S5 342 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 LRRC52Q8N7C0 313 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 CACTINQ8WUQ7 758 aaKnown RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 CPB2Q96IY4 423 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 HAPLN2Q9GZV7 340 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 TBC1D13Q9NVG8 400 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 ITGA11Q9UKX5 1188 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 PDE4DIPQ5VU43 2346 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 A0A087WWV3 80 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 ZNF233A6NK53 670 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 SFI1A8K8P3 1242 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 RECQL4O94761 1208 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 THP07101 528 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 DNAJB2P25686 324 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 FKBP3Q00688 224 aaKnown RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 ARMCX5Q6P1M9 558 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 INTS8Q75QN2 995 aaKnown RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 MAEAQ7L5Y9 396 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 FRMD5Q7Z6J6 570 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 BICD1Q96G01 975 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 BORCS6Q96GS4 357 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 CHAMP1Q96JM3 812 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 ZNF558Q96NG5 402 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 YME1L1Q96TA2 773 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 CGRRF1Q99675 332 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 KIFC3Q9BVG8 833 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 BLZF1Q9H2G9 400 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 RPF1Q9H9Y2 349 aaKnown RBP8.19□□□□□ -1.1
USP16-204ENST00000399976 HSPBP1Q9NZL4 362 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 HSFX1Q9UBD0 423 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 PCDHB12Q9Y5F1 795 aa8.19□□□□□ -1.1
USP16-204ENST00000399976 ZBBXA8MT70 800 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 ANKRD63C9JTQ0 380 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 PTGESO14684 152 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 ATICP31939 592 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 DHX8Q14562 1220 aaKnown RBP8.18□□□□□ -1.1
USP16-204ENST00000399976 ENOX2Q16206 610 aaKnown RBP8.18□□□□□ -1.1
USP16-204ENST00000399976 SLC10A6Q3KNW5 377 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 ZC2HC1CQ53FD0 456 aaPredicted RBP8.18□□□□□ -1.1
USP16-204ENST00000399976 DCLRE1AQ6PJP8 1040 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 CYP26C1Q6V0L0 522 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 SYCP3Q8IZU3 236 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 RPS6KC1Q96S38 1066 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 COLEC11Q9BWP8 271 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 PANK2Q9BZ23 570 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 NXF3Q9H4D5 531 aaKnown RBP8.18□□□□□ -1.1
USP16-204ENST00000399976 FNIP2Q9P278 1114 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 YBX2Q9Y2T7 364 aaKnown RBP8.18□□□□□ -1.1
USP16-204ENST00000399976 TTLL13PA6NNM8 815 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 SYN3O14994 580 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 BTG3Q14201 252 aaPredicted RBP8.18□□□□□ -1.1
USP16-204ENST00000399976 TTI2Q6NXR4 508 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 TMEM192Q8IY95 271 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 POMGNT1Q8WZA1 660 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 FAM81BQ96LP2 452 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 CEP295NLQ96MC4 621 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 THAP9Q9H5L6 903 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.18□□□□□ -1.1
USP16-204ENST00000399976 SPG21Q9NZD8 308 aa8.18□□□□□ -1.1
USP16-204ENST00000399976 MRPL42Q9Y6G3 142 aaKnown RBP8.18□□□□□ -1.1
USP16-204ENST00000399976 PLXNA3P51805 1871 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 N4BP1O75113 896 aaKnown RBP8.17□□□□□ -1.1
USP16-204ENST00000399976 PRPF6O94906 941 aaKnown RBP8.17□□□□□ -1.1
USP16-204ENST00000399976 NR3C1P04150 777 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 CYP11A1P05108 521 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 TYMPP19971 482 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 FGFR4P22455 802 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 PRCPP42785 496 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 CACNB1Q02641 598 aaPredicted RBP8.17□□□□□ -1.1
USP16-204ENST00000399976 CYP24A1Q07973 514 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 PTPROQ16827 1216 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 TIGD5Q53EQ6 642 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 ZNF697Q5TEC3 545 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 C15orf39Q6ZRI6 1047 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 DPH6Q7L8W6 267 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 FAM114A1Q8IWE2 563 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 GRAMD1CQ8IYS0 662 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 TTC39CQ8N584 583 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 FBXO22Q8NEZ5 403 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 BEST2Q8NFU1 509 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 ZNF560Q96MR9 790 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 NGRNQ9NPE2 291 aaKnown RBP8.17□□□□□ -1.1
USP16-204ENST00000399976 ANO10Q9NW15 660 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 GINS2Q9Y248 185 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 SMIM28A0A1B0GU29 152 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 M0QZQ0 153 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 PIRO00625 290 aa8.17□□□□□ -1.1
USP16-204ENST00000399976 MEFVO15553 781 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms