RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 POTEHQ6S545 545 aa20.06■□□□□ 0.8
UFD1-202ENST00000399523 CEP57Q86XR8 500 aa20.06■□□□□ 0.8
UFD1-202ENST00000399523 C4orf19Q8IY42 314 aa20.06■□□□□ 0.8
UFD1-202ENST00000399523 ING5Q8WYH8 240 aa20.06■□□□□ 0.8
UFD1-202ENST00000399523 ELSPBP1Q96BH3 223 aa20.06■□□□□ 0.8
UFD1-202ENST00000399523 AVENQ9NQS1 362 aaPredicted RBP20.06■□□□□ 0.8
UFD1-202ENST00000399523 KLK14Q9P0G3 267 aa20.06■□□□□ 0.8
UFD1-202ENST00000399523 MRPS23Q9Y3D9 190 aaKnown RBP20.06■□□□□ 0.8
UFD1-202ENST00000399523 YWHABP31946 246 aaKnown RBP20.05■□□□□ 0.8
UFD1-202ENST00000399523 CCR3P51677 355 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 NLRP5P59047 1200 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 SHC2P98077 582 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 MBTD1Q05BQ5 628 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 KRT32Q14532 448 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 TANGO2Q6ICL3 276 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 PRR23BQ6ZRT6 265 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 HASPINQ8TF76 798 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 MCRS1Q96EZ8 462 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 RALYQ9UKM9 306 aaKnown RBP20.05■□□□□ 0.8
UFD1-202ENST00000399523 NDRG2Q9UN36 371 aaKnown RBP20.05■□□□□ 0.8
UFD1-202ENST00000399523 PCDHA4Q9UN74 947 aa20.05■□□□□ 0.8
UFD1-202ENST00000399523 M0R2N6 131 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 GDF9O60383 454 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 FOXD2O60548 495 aaPredicted RBP20.04■□□□□ 0.8
UFD1-202ENST00000399523 KIF4AO95239 1232 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 PMLP29590 882 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 FGD1P98174 961 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 ELAVL2Q12926 359 aaKnown RBP20.04■□□□□ 0.8
UFD1-202ENST00000399523 SLC5A9Q2M3M2 681 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 SLC27A1Q6PCB7 646 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 OTUD6AQ7L8S5 288 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 FAM20AQ96MK3 541 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 MTRQ99707 1265 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 SLC26A6Q9BXS9 759 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 XPNPEP1Q9NQW7 623 aa20.04■□□□□ 0.8
UFD1-202ENST00000399523 DDX25Q9UHL0 483 aaKnown RBP20.04■□□□□ 0.8
UFD1-202ENST00000399523 A0A1B0GUA9 196 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 SLC37A4O43826 429 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 RHOP08100 348 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 IFNAR1P17181 557 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 FCARP24071 287 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 OR1D2P34982 312 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 DMWDQ09019 674 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 TFDP1Q14186 410 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 SIM2Q14190 667 aaPredicted RBP20.03■□□□□ 0.8
UFD1-202ENST00000399523 LXNQ9BS40 222 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 NFKBIZQ9BYH8 718 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 LMAN1LQ9HAT1 526 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 TRPV5Q9NQA5 729 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 PARP2Q9UGN5 583 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 ARID2Q68CP9 1835 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 ANKRD11Q6UB99 2663 aaPredicted RBP20.03■□□□□ 0.8
UFD1-202ENST00000399523 ZZEF1O43149 2961 aa20.03■□□□□ 0.8
UFD1-202ENST00000399523 CASTOR2A6NHX0 329 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 B4GALT5O43286 388 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 HRO43593 1189 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 NPTXRO95502 500 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 CXCL12P48061 93 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 XKR9Q5GH70 373 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 Q6ZUG5 572 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 BRF1Q92994 677 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 SLKQ9H2G2 1235 aaPredicted RBP20.02■□□□□ 0.8
UFD1-202ENST00000399523 BRD9Q9H8M2 597 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 KCNMB3Q9NPA1 279 aa20.02■□□□□ 0.8
UFD1-202ENST00000399523 ASPMQ8IZT6 3477 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 ZBTB39O15060 712 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 FGFR3P22607 806 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 CNR2P34972 360 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 CAPSQ13938 189 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 EPHA7Q15375 998 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 N4BP2L1Q5TBK1 243 aaPredicted RBP20.01■□□□□ 0.79
UFD1-202ENST00000399523 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.01■□□□□ 0.79
UFD1-202ENST00000399523 CDR2LQ86X02 465 aaPredicted RBP20.01■□□□□ 0.79
UFD1-202ENST00000399523 MAP4K3Q8IVH8 894 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 FBXL16Q8N461 479 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 ASAP3Q8TDY4 903 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 FAM3CQ92520 227 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 MTRRQ9UBK8 725 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 COL4A2P08572 1712 aa20.01■□□□□ 0.79
UFD1-202ENST00000399523 PTGESO14684 152 aa20■□□□□ 0.79
UFD1-202ENST00000399523 TM4SF5O14894 197 aa20■□□□□ 0.79
UFD1-202ENST00000399523 CPA1P15085 419 aa20■□□□□ 0.79
UFD1-202ENST00000399523 CEBPBP17676 345 aa20■□□□□ 0.79
UFD1-202ENST00000399523 LIMK1P53667 647 aa20■□□□□ 0.79
UFD1-202ENST00000399523 SATB1Q01826 763 aa20■□□□□ 0.79
UFD1-202ENST00000399523 GRM2Q14416 872 aa20■□□□□ 0.79
UFD1-202ENST00000399523 NAB2Q15742 525 aa20■□□□□ 0.79
UFD1-202ENST00000399523 BLIDQ8IZY5 108 aa20■□□□□ 0.79
UFD1-202ENST00000399523 DAGLBQ8NCG7 672 aa20■□□□□ 0.79
UFD1-202ENST00000399523 IRF7Q92985 503 aa20■□□□□ 0.79
UFD1-202ENST00000399523 TRMT61BQ9BVS5 477 aaKnown RBP20■□□□□ 0.79
UFD1-202ENST00000399523 ZSWIM4Q9H7M6 989 aa20■□□□□ 0.79
UFD1-202ENST00000399523 ZFP14Q9HCL3 533 aa20■□□□□ 0.79
UFD1-202ENST00000399523 RGL1Q9NZL6 768 aa20■□□□□ 0.79
UFD1-202ENST00000399523 SPAG17Q6Q759 2223 aa20■□□□□ 0.79
UFD1-202ENST00000399523 THP07101 528 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 CHRNB1P11230 501 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 PTPN2P17706 415 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 ARL2P36404 184 aa19.99■□□□□ 0.79
UFD1-202ENST00000399523 SPIRE1Q08AE8 756 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms