RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ZNFX1Q9P2E3 1918 aaKnown RBP20.89■□□□□ 0.94
COL13A1-205ENST00000398978 RARGP13631 454 aa20.89■□□□□ 0.94
COL13A1-205ENST00000398978 RRM1P23921 792 aa20.89■□□□□ 0.94
COL13A1-205ENST00000398978 SSR1P43307 286 aaKnown RBP20.89■□□□□ 0.94
COL13A1-205ENST00000398978 HP1BP3Q5SSJ5 553 aaPredicted RBP20.89■□□□□ 0.94
COL13A1-205ENST00000398978 SLC39A4Q6P5W5 647 aa20.89■□□□□ 0.94
COL13A1-205ENST00000398978 SV2AQ7L0J3 742 aa20.89■□□□□ 0.94
COL13A1-205ENST00000398978 CCDC50Q8IVM0 306 aa20.89■□□□□ 0.94
COL13A1-205ENST00000398978 PSPC1Q8WXF1 523 aaKnown RBP20.89■□□□□ 0.94
COL13A1-205ENST00000398978 ADAM33Q9BZ11 813 aa20.89■□□□□ 0.94
COL13A1-205ENST00000398978 CYP1A2P05177 515 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 RPS6P62753 249 aaKnown RBP20.89■□□□□ 0.93
COL13A1-205ENST00000398978 CDR2Q01850 454 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 SWT1Q5T5J6 900 aaKnown RBP20.89■□□□□ 0.93
COL13A1-205ENST00000398978 TBC1D31Q96DN5 1066 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 NT5C1BQ96P26 610 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 FGFR1OP2Q9NVK5 253 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 RAB20Q9NX57 234 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.89■□□□□ 0.93
COL13A1-205ENST00000398978 GZMAP12544 262 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 HSD17B4P51659 736 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 FKBP1AP62942 108 aaKnown RBP20.89■□□□□ 0.93
COL13A1-205ENST00000398978 CNGA2Q16280 664 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 TBC1D1Q86TI0 1168 aaPredicted RBP20.89■□□□□ 0.93
COL13A1-205ENST00000398978 FMNL3Q8IVF7 1028 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 FAM151AQ8WW52 585 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 TCP11Q8WWU5 503 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 ARHGEF2Q92974 986 aaKnown RBP20.89■□□□□ 0.93
COL13A1-205ENST00000398978 FAM213AQ9BRX8 229 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 GTF3C4Q9UKN8 822 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 USTQ9Y2C2 406 aa20.89■□□□□ 0.93
COL13A1-205ENST00000398978 TCP11X1B4DZS4 312 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 AGTP01019 485 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 ITGA8P53708 1063 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 TMEM161BQ8NDZ6 487 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 SYTL5Q8TDW5 730 aaPredicted RBP20.88■□□□□ 0.93
COL13A1-205ENST00000398978 DDX1Q92499 740 aaKnown RBP20.88■□□□□ 0.93
COL13A1-205ENST00000398978 AKT1S1Q96B36 256 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 ZNF277Q9NRM2 450 aaPredicted RBP20.88■□□□□ 0.93
COL13A1-205ENST00000398978 FEM1BQ9UK73 627 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 GRIN3BO60391 1043 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 ICAM1P05362 532 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 HSPA6P17066 643 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 SCP2P22307 547 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 NF2P35240 595 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 CYP4X1Q8N118 509 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 THOC1Q96FV9 657 aaKnown RBP20.88■□□□□ 0.93
COL13A1-205ENST00000398978 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.88■□□□□ 0.93
COL13A1-205ENST00000398978 SAMD15Q9P1V8 674 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 ADGRA3Q8IWK6 1321 aa20.88■□□□□ 0.93
COL13A1-205ENST00000398978 TMEM120BA0PK00 339 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 MUTP22033 750 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 WNT7BP56706 349 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 TRAF1Q13077 416 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 ANO5Q75V66 913 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 C3orf20Q8ND61 904 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 FBXL13Q8NEE6 735 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 TAOK3Q9H2K8 898 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 KMT5AQ9NQR1 393 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 AGAP1Q9UPQ3 857 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 LOC102724159A0A0B4J2E5 919 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 MPP2Q14168 576 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 PWP2Q15269 919 aaKnown RBP20.87■□□□□ 0.93
COL13A1-205ENST00000398978 SNCBQ16143 134 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 SCARA3Q6AZY7 606 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 ACAD10Q6JQN1 1059 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 PNMA8AQ86V59 439 aaPredicted RBP20.87■□□□□ 0.93
COL13A1-205ENST00000398978 BICD1Q96G01 975 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 WNK4Q96J92 1243 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 C9orf72Q96LT7 481 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 BAIAP2L1Q9UHR4 511 aa20.87■□□□□ 0.93
COL13A1-205ENST00000398978 P4HA2O15460 535 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 CLTAP09496 248 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 CETPP11597 493 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 RDXP35241 583 aaKnown RBP20.86■□□□□ 0.93
COL13A1-205ENST00000398978 PTGER2P43116 358 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 DRP2Q13474 957 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 MYBPC2Q14324 1141 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 SLMAPQ14BN4 828 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 FAM160B2Q86V87 743 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 ANKS4BQ8N8V4 417 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 CENPTQ96BT3 561 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 PARP2Q9UGN5 583 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 ADCY8P40145 1251 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 PLCB4Q15147 1175 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 CYP1B1Q16678 543 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 CAPN12Q6ZSI9 719 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 ANKS1BQ7Z6G8 1248 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 SGSM3Q96HU1 749 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 CNOT7Q9UIV1 285 aaKnown RBP20.86■□□□□ 0.93
COL13A1-205ENST00000398978 UBIAD1Q9Y5Z9 338 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 HNRNPDLO14979 420 aaKnown RBP20.86■□□□□ 0.93
COL13A1-205ENST00000398978 CHUKO15111 745 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 SPDYCQ5MJ68 293 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 PIGWQ7Z7B1 504 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 MROH7Q68CQ1 1323 aa20.86■□□□□ 0.93
COL13A1-205ENST00000398978 DMP1Q13316 513 aaPredicted RBP20.85■□□□□ 0.93
COL13A1-205ENST00000398978 NUGGCQ68CJ6 796 aa20.85■□□□□ 0.93
COL13A1-205ENST00000398978 CYFIP1Q7L576 1253 aa20.85■□□□□ 0.93
COL13A1-205ENST00000398978 OGFOD1Q8N543 542 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms