RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 FSBPO95073 299 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 AFPP02771 609 aaKnown RBP14.15□□□□□ -0.14
TOP3B-202ENST00000398793 AKAP5P24588 427 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 ZC3H12AQ5D1E8 599 aaKnown RBP14.15□□□□□ -0.14
TOP3B-202ENST00000398793 WLSQ5T9L3 541 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 STXBP4Q6ZWJ1 553 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 NIPA1Q7RTP0 329 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 PASD1Q8IV76 773 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 XXYLT1Q8NBI6 393 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 NOA1Q8NC60 698 aaKnown RBP14.15□□□□□ -0.14
TOP3B-202ENST00000398793 TRPV1Q8NER1 839 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 CCDC42Q96M95 316 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 HAPLN2Q9GZV7 340 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 SMARCAD1Q9H4L7 1026 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 HDAC6Q9UBN7 1215 aa14.15□□□□□ -0.14
TOP3B-202ENST00000398793 MYH9P35579 1960 aaKnown RBP14.14□□□□□ -0.15
TOP3B-202ENST00000398793 ANKRD33BA6NCL7 494 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 EIF3HO15372 352 aaKnown RBP eCLIP14.14□□□□□ -0.152e-6■■□□□ 11.9
TOP3B-202ENST00000398793 EZRP15311 586 aaKnown RBP14.14□□□□□ -0.15
TOP3B-202ENST00000398793 CXCR5P32302 372 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 SREBF2Q12772 1141 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 FAM182AQ5T1J6 154 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 CCDC26Q8TAB7 109 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 ZNF507Q8TCN5 953 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 TAS1R2Q8TE23 839 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 CAPZA3Q96KX2 299 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 XIRP2A4UGR9 3374 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 TTC36A6NLP5 189 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 FGFR1OPO95684 399 aaKnown RBP14.14□□□□□ -0.15
TOP3B-202ENST00000398793 LACTBP83111 547 aaPredicted RBP14.14□□□□□ -0.15
TOP3B-202ENST00000398793 GRIK4Q16099 956 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 ZNF568Q3ZCX4 644 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 PAN2Q504Q3 1202 aaKnown RBP14.14□□□□□ -0.15
TOP3B-202ENST00000398793 RUFY4Q6ZNE9 571 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 OR8K1Q8NGG5 319 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 SLC35C1Q96A29 364 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 SENP7Q9BQF6 1050 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 CREBZFQ9NS37 354 aa14.14□□□□□ -0.15
TOP3B-202ENST00000398793 MEFVO15553 781 aaPredicted RBP14.13□□□□□ -0.15
TOP3B-202ENST00000398793 IPO7O95373 1038 aaKnown RBP14.13□□□□□ -0.15
TOP3B-202ENST00000398793 VAMP7P51809 220 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 B4GALNT4Q76KP1 1039 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 ELOA2Q8IYF1 753 aaPredicted RBP14.13□□□□□ -0.15
TOP3B-202ENST00000398793 ATP8B4Q8TF62 1192 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 LMBR1Q8WVP7 490 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 PACSIN1Q9BY11 444 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 AGO2Q9UKV8 859 aaKnown RBP14.13□□□□□ -0.15
TOP3B-202ENST00000398793 PNMA2Q9UL42 364 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 PACSIN2Q9UNF0 486 aaPredicted RBP14.13□□□□□ -0.15
TOP3B-202ENST00000398793 PRRC2BQ5JSZ5 2229 aaKnown RBP14.13□□□□□ -0.15
TOP3B-202ENST00000398793 TMEM110-MUSTN1A8MSY1 372 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 PDXKO00764 312 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 CA12O43570 354 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 PRKCBP05771 671 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 MMP3P08254 477 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 CYP2C9P11712 490 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 MYL7Q01449 175 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 ARMC3Q5W041 872 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 MAMDC4Q6UXC1 1216 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 ZNF513Q8N8E2 541 aaPredicted RBP14.13□□□□□ -0.15
TOP3B-202ENST00000398793 MCPH1Q8NEM0 835 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 SPDL1Q96EA4 605 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 VIPAS39Q9H9C1 493 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 ANKEF1Q9NU02 776 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 PTPRFP10586 1907 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 ENO4A6NNW6 628 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 STX10O60499 249 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 CCDC175P0C221 793 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 CXCL8P10145 99 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 RGS2P41220 211 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 DGKDQ16760 1214 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 TRIM59Q8IWR1 403 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 C7orf31Q8N865 590 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 OR5B17Q8NGF7 314 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 OLFML3Q9NRN5 406 aa14.13□□□□□ -0.15
TOP3B-202ENST00000398793 CTAGE9A4FU28 777 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 RCCD1A6NED2 376 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 ATMINO43313 823 aaPredicted RBP14.12□□□□□ -0.15
TOP3B-202ENST00000398793 SRGAP2O75044 1071 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 TGFB3P10600 412 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 ARHGAP25P42331 645 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 CACNB2Q08289 660 aaPredicted RBP14.12□□□□□ -0.15
TOP3B-202ENST00000398793 SNX1Q13596 522 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 LAMC2Q13753 1193 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 MAPK6Q16659 721 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 LLGL2Q6P1M3 1020 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 EPM2AIP1Q7L775 607 aaPredicted RBP14.12□□□□□ -0.15
TOP3B-202ENST00000398793 ARHGEF19Q8IW93 802 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 MICAL1Q8TDZ2 1067 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 NHEJ1Q9H9Q4 299 aaPredicted RBP14.12□□□□□ -0.15
TOP3B-202ENST00000398793 SLC5A4Q9NY91 659 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 SMARCAL1Q9NZC9 954 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 PTPRJQ12913 1337 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 PASKQ96RG2 1323 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 ZNFX1Q9P2E3 1918 aaKnown RBP14.12□□□□□ -0.15
TOP3B-202ENST00000398793 ZBTB42B2RXF5 422 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 RWDD2BP57060 319 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 KLHL30Q0D2K2 578 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 NOGQ13253 232 aa14.12□□□□□ -0.15
TOP3B-202ENST00000398793 RBBP5Q15291 538 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms