RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 RAB27AP51159 221 aa27.82■■■□□ 2.04
U2AF1-203ENST00000398137 ALCAMQ13740 583 aa27.82■■■□□ 2.04
U2AF1-203ENST00000398137 PDE12Q6L8Q7 609 aaKnown RBP27.82■■■□□ 2.04
U2AF1-203ENST00000398137 ADHFE1Q8IWW8 467 aa27.82■■■□□ 2.04
U2AF1-203ENST00000398137 ACO2Q99798 780 aaKnown RBP27.82■■■□□ 2.04
U2AF1-203ENST00000398137 C1QTNF1Q9BXJ1 281 aa27.82■■■□□ 2.04
U2AF1-203ENST00000398137 MRPL9Q9BYD2 267 aaKnown RBP27.82■■■□□ 2.04
U2AF1-203ENST00000398137 CLSTN2Q9H4D0 955 aa27.82■■■□□ 2.04
U2AF1-203ENST00000398137 NRDE2Q9H7Z3 1164 aa27.82■■■□□ 2.04
U2AF1-203ENST00000398137 PCDHB13Q9Y5F0 798 aa27.82■■■□□ 2.04
U2AF1-203ENST00000398137 PCDHA5Q9Y5H7 936 aa27.82■■■□□ 2.04
U2AF1-203ENST00000398137 PRPF6O94906 941 aaKnown RBP27.81■■■□□ 2.04
U2AF1-203ENST00000398137 NPTXRO95502 500 aa27.81■■■□□ 2.04
U2AF1-203ENST00000398137 SKIP12755 728 aa27.81■■■□□ 2.04
U2AF1-203ENST00000398137 KCNA1Q09470 495 aa27.81■■■□□ 2.04
U2AF1-203ENST00000398137 L1TD1Q5T7N2 865 aaKnown RBP27.81■■■□□ 2.04
U2AF1-203ENST00000398137 SLC27A1Q6PCB7 646 aa27.81■■■□□ 2.04
U2AF1-203ENST00000398137 STXBP4Q6ZWJ1 553 aa27.81■■■□□ 2.04
U2AF1-203ENST00000398137 BCL7CQ8WUZ0 217 aaPredicted RBP27.81■■■□□ 2.04
U2AF1-203ENST00000398137 SMARCE1Q969G3 411 aa27.81■■■□□ 2.04
U2AF1-203ENST00000398137 IKZF4Q9H2S9 585 aa27.81■■■□□ 2.04
U2AF1-203ENST00000398137 FAM50BQ9Y247 325 aa27.81■■■□□ 2.04
U2AF1-203ENST00000398137 HNRNPDLO14979 420 aaKnown RBP27.8■■■□□ 2.04
U2AF1-203ENST00000398137 RHOBTB3O94955 611 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 SSTR3P32745 418 aaPredicted RBP27.8■■■□□ 2.04
U2AF1-203ENST00000398137 LIG4P49917 911 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 STK4Q13043 487 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 KCNB1Q14721 858 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 NOMO2Q5JPE7 1267 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 KIAA0895Q8NCT3 520 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 SMG8Q8ND04 991 aaKnown RBP27.8■■■□□ 2.04
U2AF1-203ENST00000398137 ACCSQ96QU6 501 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 ANKFY1Q9P2R3 1169 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 DNAJB4Q9UDY4 337 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 TNFSF13BQ9Y275 285 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 INPP5FQ9Y2H2 1132 aa27.8■■■□□ 2.04
U2AF1-203ENST00000398137 EIF3DO15371 548 aaKnown RBP eCLIP27.79■■■□□ 2.04
U2AF1-203ENST00000398137 MBD3O95983 291 aa27.79■■■□□ 2.04
U2AF1-203ENST00000398137 ZNF568Q3ZCX4 644 aa27.79■■■□□ 2.04
U2AF1-203ENST00000398137 GLB1LQ6UWU2 654 aa27.79■■■□□ 2.04
U2AF1-203ENST00000398137 ZPBP2Q6X784 338 aa27.79■■■□□ 2.04
U2AF1-203ENST00000398137 TMEM184AQ6ZMB5 413 aa27.79■■■□□ 2.04
U2AF1-203ENST00000398137 EPM2AIP1Q7L775 607 aaPredicted RBP27.79■■■□□ 2.04
U2AF1-203ENST00000398137 ZNF280BQ86YH2 543 aa27.79■■■□□ 2.04
U2AF1-203ENST00000398137 CDCA3Q99618 268 aaPredicted RBP27.79■■■□□ 2.04
U2AF1-203ENST00000398137 ADPGKQ9BRR6 497 aa27.79■■■□□ 2.04
U2AF1-203ENST00000398137 LRFN3Q9BTN0 628 aa27.79■■■□□ 2.04
U2AF1-203ENST00000398137 TRIM6Q9C030 488 aaPredicted RBP27.79■■■□□ 2.04
U2AF1-203ENST00000398137 ENTPD7Q9NQZ7 604 aa27.79■■■□□ 2.04
U2AF1-203ENST00000398137 PUF60Q9UHX1 559 aaKnown RBP27.79■■■□□ 2.04
U2AF1-203ENST00000398137 ZC3H11AO75152 810 aaKnown RBP eCLIP27.78■■■□□ 2.04
U2AF1-203ENST00000398137 PIGRP01833 764 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 GALTP07902 379 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 PSMD2Q13200 908 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 ZBTB33Q86T24 672 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 SPATA20Q8TB22 786 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 ZBTB45Q96K62 511 aaPredicted RBP27.78■■■□□ 2.04
U2AF1-203ENST00000398137 GSDMAQ96QA5 445 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 NUP62CLQ9H1M0 184 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 CDT1Q9H211 546 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 NGRNQ9NPE2 291 aaKnown RBP27.78■■■□□ 2.04
U2AF1-203ENST00000398137 RMND1Q9NWS8 449 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 EXOC7Q9UPT5 735 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 GDAQ9Y2T3 454 aa27.78■■■□□ 2.04
U2AF1-203ENST00000398137 ZMYM2Q9UBW7 1377 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 UBE4BO95155 1302 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 TISP43B9A030 160 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 ABLIM1O14639 778 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 TOM1L1O75674 476 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 DDHD2O94830 711 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 HARSP12081 509 aaKnown RBP27.77■■■□□ 2.04
U2AF1-203ENST00000398137 ALDH7A1P49419 539 aaKnown RBP27.77■■■□□ 2.04
U2AF1-203ENST00000398137 KRT17Q04695 432 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 DCAF4L1Q3SXM0 396 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 SLC39A4Q6P5W5 647 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 MPZL3Q6UWV2 235 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 NELFCDQ8IXH7 590 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 SYCP3Q8IZU3 236 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 SCFD1Q8WVM8 642 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 RSPH1Q8WYR4 309 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 TCHPQ9BT92 498 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 VN1R3Q9BXE9 311 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 NXF3Q9H4D5 531 aaKnown RBP27.77■■■□□ 2.04
U2AF1-203ENST00000398137 PTPRHQ9HD43 1115 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 HES2Q9Y543 173 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 IPPQ9Y573 584 aa27.77■■■□□ 2.04
U2AF1-203ENST00000398137 FAM86C2PA6NEL3 165 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 C2orf71A6NGG8 1288 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 ANKRD63C9JTQ0 380 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 PROZP22891 400 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 MATR3P43243 847 aaKnown RBP eCLIP27.76■■■□□ 2.03
U2AF1-203ENST00000398137 SLC11A1P49279 550 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 TMC7Q7Z402 723 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 MRPL43Q8N983 215 aaKnown RBP27.76■■■□□ 2.03
U2AF1-203ENST00000398137 PGBD4Q96DM1 585 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 IGSF21Q96ID5 467 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 APOL6Q9BWW8 343 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 RNF39Q9H2S5 420 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 RSAD1Q9HA92 442 aa27.76■■■□□ 2.03
U2AF1-203ENST00000398137 MAN1B1Q9UKM7 699 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms