RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 LRRN2O75325 713 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 GYPCP04921 128 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 CASP14P31944 242 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 GRM5P41594 1212 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 ADKP55263 362 aaKnown RBP22.95■■□□□ 1.26
CPNE1-204ENST00000397443 CCL23P55773 120 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 OR5B17Q8NGF7 314 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 ELMO3Q96BJ8 720 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 SCLYQ96I15 445 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 CGRRF1Q99675 332 aa22.95■■□□□ 1.26
CPNE1-204ENST00000397443 IFIH1Q9BYX4 1025 aaKnown RBP22.95■■□□□ 1.26
CPNE1-204ENST00000397443 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.95■■□□□ 1.268e-7■□□□□ 11.3
CPNE1-204ENST00000397443 STX10O60499 249 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 MGEA5O60502 916 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 TFAMQ00059 246 aaKnown RBP22.94■■□□□ 1.26
CPNE1-204ENST00000397443 BIRC3Q13489 604 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 SLC10A6Q3KNW5 377 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 SV2AQ7L0J3 742 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 CXCL16Q9H2A7 254 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 RNF39Q9H2S5 420 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 TMX1Q9H3N1 280 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 TMEM8AQ9HCN3 771 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 PCDH10Q9P2E7 1040 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 IMPACTQ9P2X3 320 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 PARP2Q9UGN5 583 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 IPPQ9Y573 584 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 CITO14578 2027 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 RNF225M0QZC1 329 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-204ENST00000397443 PON1P27169 355 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 CYP2C18P33260 490 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 LRMPQ12912 555 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 TBX2Q13207 712 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-204ENST00000397443 KRT39Q6A163 491 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 NEK11Q8NG66 645 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 ZNF830Q96NB3 372 aaPredicted RBP22.94■■□□□ 1.26
CPNE1-204ENST00000397443 TOX2Q96NM4 488 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 MTMR12Q9C0I1 747 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 KLK14Q9P0G3 267 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 PCDHB2Q9Y5E7 798 aa22.94■■□□□ 1.26
CPNE1-204ENST00000397443 N4BP1O75113 896 aaKnown RBP22.93■■□□□ 1.26
CPNE1-204ENST00000397443 RECQL4O94761 1208 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 CLSTN1O94985 981 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 FXR1P51114 621 aaKnown RBP eCLIP22.93■■□□□ 1.26
CPNE1-204ENST00000397443 CETN1Q12798 172 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 KYAT1Q16773 422 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 EFCAB13Q8IY85 973 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 TMEM130Q8N3G9 435 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 USP38Q8NB14 1042 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 RNF169Q8NCN4 708 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 SMG8Q8ND04 991 aaKnown RBP22.93■■□□□ 1.26
CPNE1-204ENST00000397443 CCDC51Q96ER9 411 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 ADAM2Q99965 735 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 CHST12Q9NRB3 414 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 TMEM39AQ9NV64 488 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 ANK1P16157 1881 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 TRIP11Q15643 1979 aa22.93■■□□□ 1.26
CPNE1-204ENST00000397443 TTC26A0AVF1 554 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 PITPNM1O00562 1244 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 NBNO60934 754 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 NFICP08651 508 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 YARSP54577 528 aaKnown RBP22.92■■□□□ 1.26
CPNE1-204ENST00000397443 C1orf53Q5VUE5 145 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 TDRD10Q5VZ19 366 aaKnown RBP22.92■■□□□ 1.26
CPNE1-204ENST00000397443 JADE1Q6IE81 842 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 GPIHBP1Q8IV16 184 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 TAS1R2Q8TE23 839 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 INTS2Q9H0H0 1204 aaKnown RBP22.92■■□□□ 1.26
CPNE1-204ENST00000397443 FAM105AQ9NUU6 356 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 IL18RAPO95256 599 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 TPM1P09493 284 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 CLDN10P78369 228 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 GJB7Q6PEY0 223 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 WDR49Q8IV35 697 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 NLRC4Q9NPP4 1024 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 PRDM5Q9NQX1 630 aaPredicted RBP22.92■■□□□ 1.26
CPNE1-204ENST00000397443 SQORQ9Y6N5 450 aa22.92■■□□□ 1.26
CPNE1-204ENST00000397443 GTPBP10A4D1E9 387 aaKnown RBP22.91■■□□□ 1.26
CPNE1-204ENST00000397443 MEIS3P2A8K0S8 358 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 PHACTR2O75167 634 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 TMEM191BP0C7N4 346 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 GTF2H1P32780 548 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 SURF1Q15526 300 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 GLRA4Q5JXX5 417 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 SCARA3Q6AZY7 606 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 TRIM65Q6PJ69 517 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 SEMA4DQ92854 862 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 LPPQ93052 612 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 TRIM44Q96DX7 344 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-204ENST00000397443 SCN5AQ14524 2016 aa22.91■■□□□ 1.26
CPNE1-204ENST00000397443 AKR1B15C9JRZ8 316 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-204ENST00000397443 NOL4O94818 638 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 C4BPAP04003 597 aaKnown RBP22.9■■□□□ 1.26
CPNE1-204ENST00000397443 CLTBP09497 229 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 MCCD1P59942 119 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-204ENST00000397443 POLR2FP61218 127 aaKnown RBP22.9■■□□□ 1.26
CPNE1-204ENST00000397443 GPNMBQ14956 572 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 FBXL13Q8NEE6 735 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 PI4K2AQ9BTU6 479 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 WNT8AQ9H1J5 351 aa22.9■■□□□ 1.26
CPNE1-204ENST00000397443 TET1Q8NFU7 2136 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms