RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TBX3O15119 743 aa16.61■□□□□ 0.25
SEC13-206ENST00000397102 B4GALT5O43286 388 aa16.61■□□□□ 0.25
SEC13-206ENST00000397102 KIF4AO95239 1232 aa16.61■□□□□ 0.25
SEC13-206ENST00000397102 GCFC2P16383 781 aaKnown RBP16.61■□□□□ 0.25
SEC13-206ENST00000397102 ADCY1Q08828 1119 aa16.61■□□□□ 0.25
SEC13-206ENST00000397102 ELAVL2Q12926 359 aaKnown RBP16.61■□□□□ 0.25
SEC13-206ENST00000397102 PABPC1LQ4VXU2 614 aaKnown RBP16.61■□□□□ 0.25
SEC13-206ENST00000397102 AXDND1Q5T1B0 1012 aaPredicted RBP16.61■□□□□ 0.25
SEC13-206ENST00000397102 PPP4R3AQ6IN85 833 aa16.61■□□□□ 0.25
SEC13-206ENST00000397102 CDR2LQ86X02 465 aaPredicted RBP16.61■□□□□ 0.25
SEC13-206ENST00000397102 ASAP3Q8TDY4 903 aa16.61■□□□□ 0.25
SEC13-206ENST00000397102 DYDC2Q96IM9 177 aa16.61■□□□□ 0.25
SEC13-206ENST00000397102 HCFC1R1Q9NWW0 138 aa16.61■□□□□ 0.25
SEC13-206ENST00000397102 DNMT3BQ9UBC3 853 aaKnown RBP16.61■□□□□ 0.25
SEC13-206ENST00000397102 SNX14Q9Y5W7 946 aa16.61■□□□□ 0.25
SEC13-206ENST00000397102 A0A1B0GUA9 196 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 CASTOR2A6NHX0 329 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 ZBTB39O15060 712 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 ADAM12O43184 909 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 FZD5Q13467 585 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 RAB33AQ14088 237 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
SEC13-206ENST00000397102 RTL10Q7L3V2 364 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 NEK8Q86SG6 692 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 HAS1Q92839 578 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 HEBP1Q9NRV9 189 aa16.6■□□□□ 0.25
SEC13-206ENST00000397102 MAP1BP46821 2468 aaKnown RBP16.6■□□□□ 0.25
SEC13-206ENST00000397102 DGAT1O75907 488 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 HSPA4P34932 840 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 ARL2P36404 184 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 NRLP54845 237 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 CYP4A11Q02928 519 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 MTAPQ13126 283 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 NCAPH2Q6IBW4 605 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 NETO1Q8TDF5 533 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 ING5Q8WYH8 240 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 DNASE1L2Q92874 299 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 IER2Q9BTL4 223 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 PLA2G2FQ9BZM2 168 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 GDE1Q9NZC3 331 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 RAB23Q9ULC3 237 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 MRPS23Q9Y3D9 190 aaKnown RBP16.59■□□□□ 0.25
SEC13-206ENST00000397102 COL4A2P08572 1712 aa16.59■□□□□ 0.25
SEC13-206ENST00000397102 CCDC194A0A1B0GVG4 234 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 SHISA7A6NL88 538 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 MARCH6O60337 910 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 CDC45O75419 566 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 TDGF1P13385 188 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 GLRA2P23416 452 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 OR1D2P34982 312 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 SPIRE1Q08AE8 756 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 SPEM2Q0P670 501 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 PPP2R5DQ14738 602 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 LAIR1Q6GTX8 287 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.58■□□□□ 0.24
SEC13-206ENST00000397102 MAMSTRQ6ZN01 415 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 MCRS1Q96EZ8 462 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.24
SEC13-206ENST00000397102 NAP1L4Q99733 375 aaKnown RBP16.58■□□□□ 0.24
SEC13-206ENST00000397102 CHRDQ9H2X0 955 aa16.58■□□□□ 0.24
SEC13-206ENST00000397102 AVENQ9NQS1 362 aaPredicted RBP16.58■□□□□ 0.24
SEC13-206ENST00000397102 PTGESO14684 152 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 CPLX1O14810 134 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 SLC30A4O14863 429 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 CCNT1O60563 726 aaKnown RBP16.57■□□□□ 0.24
SEC13-206ENST00000397102 LRP3O75074 770 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 SLITRK3O94933 977 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 LYPLA2O95372 231 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 THP07101 528 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 PSMA5P28066 241 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 NAB2Q15742 525 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 PPM1JQ5JR12 505 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 PPP4R3CPQ6ZMV5 832 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 TPH2Q8IWU9 490 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 ZNF687Q8N1G0 1237 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 CELF5Q8N6W0 485 aaKnown RBP16.57■□□□□ 0.24
SEC13-206ENST00000397102 ELSPBP1Q96BH3 223 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 PRIMPOLQ96LW4 560 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 AIFM3Q96NN9 605 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 ANKEF1Q9NU02 776 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 MTRRQ9UBK8 725 aa16.57■□□□□ 0.24
SEC13-206ENST00000397102 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.57■□□□□ 0.24
SEC13-206ENST00000397102 MAN2B1O00754 1011 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 RETP07949 1114 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 RHOP08100 348 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 FGFR3P22607 806 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 SLC5A9Q2M3M2 681 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 TANGO2Q6ICL3 276 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 SLFN12Q8IYM2 578 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 POLR3FQ9H1D9 316 aaPredicted RBP16.56■□□□□ 0.24
SEC13-206ENST00000397102 PRMT7Q9NVM4 692 aaPredicted RBP16.56■□□□□ 0.24
SEC13-206ENST00000397102 NDRG2Q9UN36 371 aaKnown RBP16.56■□□□□ 0.24
SEC13-206ENST00000397102 KCNJ14Q9UNX9 436 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 RALGAPA1Q6GYQ0 2036 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 TICRRQ7Z2Z1 1910 aa16.56■□□□□ 0.24
SEC13-206ENST00000397102 TMEM189-UBE2V1I3L0A0 370 aa16.55■□□□□ 0.24
SEC13-206ENST00000397102 BAG4O95429 457 aaKnown RBP16.55■□□□□ 0.24
SEC13-206ENST00000397102 CCR3P51677 355 aa16.55■□□□□ 0.24
SEC13-206ENST00000397102 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
SEC13-206ENST00000397102 TOB2Q14106 344 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms