RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 FAM171A1Q5VUB5 890 aa19.83■□□□□ 0.77
CXCL12-204ENST00000395793 CD300LGQ6UXG3 332 aa19.83■□□□□ 0.77
CXCL12-204ENST00000395793 OTOP3Q7RTS5 596 aa19.83■□□□□ 0.77
CXCL12-204ENST00000395793 PLCD3Q8N3E9 789 aa19.83■□□□□ 0.77
CXCL12-204ENST00000395793 PIK3R5Q8WYR1 880 aa19.83■□□□□ 0.77
CXCL12-204ENST00000395793 PHOX2BQ99453 314 aa19.83■□□□□ 0.77
CXCL12-204ENST00000395793 ACO2Q99798 780 aaKnown RBP19.83■□□□□ 0.77
CXCL12-204ENST00000395793 RHOBTB2Q9BYZ6 727 aa19.83■□□□□ 0.77
CXCL12-204ENST00000395793 GOLGA2P5Q9HBQ8 144 aa19.83■□□□□ 0.77
CXCL12-204ENST00000395793 PTPRHQ9HD43 1115 aa19.83■□□□□ 0.77
CXCL12-204ENST00000395793 WDR6Q9NNW5 1121 aaKnown RBP19.83■□□□□ 0.77
CXCL12-204ENST00000395793 SFI1A8K8P3 1242 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 ADAM12O43184 909 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 AVPR2P30518 371 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 ZRSR1Q15695 479 aaKnown RBP19.82■□□□□ 0.76
CXCL12-204ENST00000395793 LNX1Q8TBB1 728 aaPredicted RBP19.82■□□□□ 0.76
CXCL12-204ENST00000395793 HDAC7Q8WUI4 952 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 SMG7Q92540 1137 aaKnown RBP19.82■□□□□ 0.76
CXCL12-204ENST00000395793 ACSF2Q96CM8 615 aaPredicted RBP19.82■□□□□ 0.76
CXCL12-204ENST00000395793 TBC1D32Q96NH3 1257 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 MYADMQ96S97 322 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 PLIN2Q99541 437 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 CLSTN3Q9BQT9 956 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 TTPALQ9BTX7 342 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 TARS2Q9BW92 718 aaKnown RBP19.82■□□□□ 0.76
CXCL12-204ENST00000395793 TMEM134Q9H6X4 195 aa19.82■□□□□ 0.76
CXCL12-204ENST00000395793 VWA3AA6NCI4 1184 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 SLC16A4O15374 487 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 MEFVO15553 781 aaPredicted RBP19.81■□□□□ 0.76
CXCL12-204ENST00000395793 C1RP00736 705 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 GRM5P41594 1212 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 SOX4Q06945 474 aaPredicted RBP19.81■□□□□ 0.76
CXCL12-204ENST00000395793 RAD51AP2Q09MP3 1159 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 DMP1Q13316 513 aaPredicted RBP19.81■□□□□ 0.76
CXCL12-204ENST00000395793 PSMD5Q16401 504 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 ZNF568Q3ZCX4 644 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 CEP57Q86XR8 500 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 C3orf58Q8NDZ4 430 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 LRRC15Q8TF66 581 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 DRC1Q96MC2 740 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 NT5C3AQ9H0P0 336 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 PLEKHA4Q9H4M7 779 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 KMT5AQ9NQR1 393 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 FBXW11Q9UKB1 542 aa19.81■□□□□ 0.76
CXCL12-204ENST00000395793 CACNA1HO95180 2353 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 H3BQV1 296 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 PROZP22891 400 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 GUCY2CP25092 1073 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 MRE11P49959 708 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 CLCNKBP51801 687 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 SLC12A3P55017 1021 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 OSTNP61366 133 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 CREMQ03060 361 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 TMEM119Q4V9L6 283 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 XKR4Q5GH76 650 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 CYP26C1Q6V0L0 522 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 ZBTB45Q96K62 511 aaPredicted RBP19.8■□□□□ 0.76
CXCL12-204ENST00000395793 MRPL4Q9BYD3 311 aaKnown RBP19.8■□□□□ 0.76
CXCL12-204ENST00000395793 KCNK12Q9HB15 430 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 ZDHHC7Q9NXF8 308 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 NOTCH4Q99466 2003 aa19.8■□□□□ 0.76
CXCL12-204ENST00000395793 NPHP3-ACAD11A0A0J9YXS1 232 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 SMIM28A0A1B0GU29 152 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 TMEM189-UBE2V1I3L0A0 370 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 I3L4J1 428 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 ZMYND10O75800 440 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 FGFR3P22607 806 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 ELMSAN1Q6PJG2 1045 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 ALKAL1Q6UXT8 129 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 SYT2Q8N9I0 419 aaPredicted RBP19.79■□□□□ 0.76
CXCL12-204ENST00000395793 RSAD2Q8WXG1 361 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 SNX27Q96L92 541 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 ZMAT2Q96NC0 199 aaKnown RBP19.79■□□□□ 0.76
CXCL12-204ENST00000395793 PRKD2Q9BZL6 878 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 DPP7Q9UHL4 492 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 SMC3Q9UQE7 1217 aa19.79■□□□□ 0.76
CXCL12-204ENST00000395793 NARSO43776 548 aaKnown RBP19.78■□□□□ 0.76
CXCL12-204ENST00000395793 GBP2P32456 591 aaPredicted RBP19.78■□□□□ 0.76
CXCL12-204ENST00000395793 BRCC3P46736 316 aa19.78■□□□□ 0.76
CXCL12-204ENST00000395793 PTPN5P54829 565 aa19.78■□□□□ 0.76
CXCL12-204ENST00000395793 CACNB1Q02641 598 aaPredicted RBP19.78■□□□□ 0.76
CXCL12-204ENST00000395793 GRIN1Q05586 938 aa19.78■□□□□ 0.76
CXCL12-204ENST00000395793 UPP1Q16831 310 aa19.78■□□□□ 0.76
CXCL12-204ENST00000395793 ARL6IP4Q66PJ3 421 aaKnown RBP19.78■□□□□ 0.76
CXCL12-204ENST00000395793 RSPO2Q6UXX9 243 aaPredicted RBP19.78■□□□□ 0.76
CXCL12-204ENST00000395793 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.78■□□□□ 0.76
CXCL12-204ENST00000395793 TMEM105Q8N8V8 129 aa19.78■□□□□ 0.76
CXCL12-204ENST00000395793 NTPCRQ9BSD7 190 aaKnown RBP19.78■□□□□ 0.76
CXCL12-204ENST00000395793 CCDC94Q9BW85 323 aaPredicted RBP19.78■□□□□ 0.76
CXCL12-204ENST00000395793 C17orf75Q9HAS0 396 aa19.78■□□□□ 0.76
CXCL12-204ENST00000395793 B3GAT3O94766 335 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 PLA2G4BP0C869 781 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 MCF2P10911 925 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 PLS3P13797 630 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 TKTP29401 623 aaKnown RBP19.77■□□□□ 0.76
CXCL12-204ENST00000395793 MCM2P49736 904 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 ELAVL2Q12926 359 aaKnown RBP19.77■□□□□ 0.76
CXCL12-204ENST00000395793 TDGQ13569 410 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 ARSHQ5FYA8 562 aa19.77■□□□□ 0.76
CXCL12-204ENST00000395793 DCLRE1AQ6PJP8 1040 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms