RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 BFSP2Q13515 415 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 RAPGEF1Q13905 1077 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 KIAA1328Q86T90 577 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 EHBP1Q8NDI1 1231 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 CAGE1Q8TC20 777 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 NLRP7Q8WX94 980 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 SCLT1Q96NL6 688 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 CELF4Q9BZC1 486 aaKnown RBP20.89■□□□□ 0.93
LMNB1-202ENST00000395354 INTS2Q9H0H0 1204 aaKnown RBP20.89■□□□□ 0.93
LMNB1-202ENST00000395354 ADAMTS10Q9H324 1103 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 TMEM39AQ9NV64 488 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 FHOD1Q9Y613 1164 aa20.89■□□□□ 0.93
LMNB1-202ENST00000395354 A0A087WZ62 844 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 M0QZ92 97 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 KRT86O43790 486 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 AKR1B10O60218 316 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 CAND2O75155 1236 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 PLEKP08567 350 aaPredicted RBP20.88■□□□□ 0.93
LMNB1-202ENST00000395354 CLTBP09497 229 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 CKBP12277 381 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 PRKCIP41743 596 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 VAV2P52735 878 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 APBA1Q02410 837 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 POU5F1BQ06416 359 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 C1orf220Q5T0J3 134 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 ZNF618Q5T7W0 954 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 ZNF410Q86VK4 478 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 FDXACB1Q9BRP7 624 aaPredicted RBP20.88■□□□□ 0.93
LMNB1-202ENST00000395354 CDHR5Q9HBB8 845 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 CDY2AQ9Y6F7 541 aa20.88■□□□□ 0.93
LMNB1-202ENST00000395354 EXTL3O43909 919 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 CHRNA1P02708 482 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 ADRB2P07550 413 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 CTSHP09668 335 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 DLG4P78352 724 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 KLHL30Q0D2K2 578 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 TDRD12Q587J7 1177 aaKnown RBP20.87■□□□□ 0.93
LMNB1-202ENST00000395354 CDCA2Q69YH5 1023 aaPredicted RBP20.87■□□□□ 0.93
LMNB1-202ENST00000395354 CBWD2Q8IUF1 395 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 PARD3BQ8TEW8 1205 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 JAKMIP2Q96AA8 810 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 WDR24Q96S15 920 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 HTATIP2Q9BUP3 242 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 STK33Q9BYT3 514 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 C2orf40Q9H1Z8 148 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 IFT122Q9HBG6 1241 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 TRPV2Q9Y5S1 764 aa20.87■□□□□ 0.93
LMNB1-202ENST00000395354 A0A0U1RQJ8 604 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 DYNC1I1O14576 645 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 LDHAP00338 332 aaKnown RBP20.86■□□□□ 0.93
LMNB1-202ENST00000395354 CRYBB1P53674 252 aaPredicted RBP20.86■□□□□ 0.93
LMNB1-202ENST00000395354 PTENP60484 403 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 CYP24A1Q07973 514 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 PPP3CAQ08209 521 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 EPC2Q52LR7 807 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 FAM26DQ5JW98 314 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 IQCEQ6IPM2 695 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 ZPBP2Q6X784 338 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 IRF2BP2Q7Z5L9 587 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 LMO3Q8TAP4 145 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 PLEKHO2Q8TD55 490 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 ATRIPQ8WXE1 791 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 OSMRQ99650 979 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 HIPK3Q9H422 1215 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 LUC7LQ9NQ29 371 aaKnown RBP20.86■□□□□ 0.93
LMNB1-202ENST00000395354 APEX2Q9UBZ4 518 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 TBX21Q9UL17 535 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 PCDHA13Q9Y5I0 950 aa20.86■□□□□ 0.93
LMNB1-202ENST00000395354 GOLGA8IPA6NC78 632 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 ZNF233A6NK53 670 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 GOLGA8JA6NMD2 632 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 PITPNM1O00562 1244 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 ZNF263O14978 683 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 CTIFO43310 598 aaKnown RBP20.85■□□□□ 0.93
LMNB1-202ENST00000395354 SELPP16109 830 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 FERP16591 822 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 STAT1P42224 750 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 PHKA2P46019 1235 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 MGAT3Q09327 533 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 TUBB2AQ13885 445 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 CCDC122Q5T0U0 273 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 ZSWIM2Q8NEG5 633 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 SAAL1Q96ER3 474 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 TUBB2BQ9BVA1 445 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 IFIH1Q9BYX4 1025 aaKnown RBP20.85■□□□□ 0.93
LMNB1-202ENST00000395354 GCOM2Q9BZD3 368 aaPredicted RBP20.85■□□□□ 0.93
LMNB1-202ENST00000395354 FANCGO15287 622 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 CCDC172P0C7W6 258 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 MXI1P50539 228 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 KIF5AQ12840 1032 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 ZNF569Q5MCW4 686 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 ZBTB8OSQ8IWT0 167 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 NFKBIZQ9BYH8 718 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 PPP1R12CQ9BZL4 782 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 CCDC113Q9H0I3 377 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 TMEM8AQ9HCN3 771 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 PRDM5Q9NQX1 630 aaPredicted RBP20.85■□□□□ 0.93
LMNB1-202ENST00000395354 DNAJC12Q9UKB3 198 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 COQ4Q9Y3A0 265 aa20.85■□□□□ 0.93
LMNB1-202ENST00000395354 PJA2O43164 708 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms