RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 HINFPQ9BQA5 517 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 THUMPD2Q9BTF0 503 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 SLC52A2Q9HAB3 445 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 RTEL1Q9NZ71 1219 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 FBXL21Q9UKT6 434 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 RNF112Q9ULX5 631 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 EIF1AYO14602 144 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 SEC24BO95487 1268 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 RHOXF2BP0C7M4 288 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ADCY8P40145 1251 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ABCG1P45844 678 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 PLCD1P51178 756 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 PTPN5P54829 565 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 HNRNPH2P55795 449 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 STARD6P59095 220 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ANO4Q32M45 955 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 FBXO48Q5FWF7 155 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 ZMIZ2Q8NF64 920 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 DIS3LQ8TF46 1054 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 SLC5A11Q8WWX8 675 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 GAL3ST1Q99999 423 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 RHOXF2Q9BQY4 288 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 TMEM120AQ9BXJ8 343 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 MTRF1LQ9UGC7 380 aaKnown RBP4.57□□□□□ -1.68
HERC4-204ENST00000395198 L1RE1Q9UN81 338 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 MED16Q9Y2X0 877 aa4.57□□□□□ -1.68
HERC4-204ENST00000395198 A0A1B0GUL7 405 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 FRMD3A2A2Y4 597 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 SLC9B1P1A6NJY1 282 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 H7BY64 318 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 CHGBP05060 677 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 POTEJP0CG39 1038 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MC4RP32245 332 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 IL13P35225 146 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 RARSP54136 660 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 CARD18P57730 90 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 POLR2GP62487 172 aaKnown RBP eCLIP4.56□□□□□ -1.68
HERC4-204ENST00000395198 EN1Q05925 392 aaPredicted RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 DHX34Q14147 1143 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 C6orf15Q6UXA7 325 aaPredicted RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 ZNF764Q96H86 408 aaPredicted RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 CSRNP1Q96S65 589 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PIP5K1AQ99755 562 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 LIMCH1Q9UPQ0 1083 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MAPK8IP3Q9UPT6 1336 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PTCD1O75127 700 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 ZPR1O75312 459 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MLYCDO95822 493 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PSAPP07602 524 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 TPM1P09493 284 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 CCDC192P0DO97 292 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 HOXA6P31267 233 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PSMC2P35998 433 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 PPARGP37231 505 aaPredicted RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 TNFAIP2Q03169 654 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 SEMA5AQ13591 1074 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PFKFB3Q16875 520 aaPredicted RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 C1orf141Q5JVX7 400 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 OLFML2BQ68BL8 750 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MTFR2Q6P444 385 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 ZNF321PQ8N8H1 164 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 ZSWIM2Q8NEG5 633 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MIPOL1Q8TD10 442 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 WHAMMQ8TF30 809 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 ZC3H10Q96K80 434 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 TRIM47Q96LD4 638 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 STMN4Q9H169 189 aaPredicted RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 NTN4Q9HB63 628 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 SEPT11Q9NVA2 429 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 HAUS2Q9NVX0 235 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 EXTL2Q9UBQ6 330 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 HMGXB4Q9UGU5 601 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 POLIQ9UNA4 740 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 RPH3AQ9Y2J0 694 aaPredicted RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 TELO2Q9Y4R8 837 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 A0A1W2PQ67 120 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PMS2P1A4D2B8 440 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 SPDYE3A6NKU9 549 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PROM1O43490 865 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 ACTN4O43707 911 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 DLDP09622 509 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 PRR35P0CG20 571 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 XRCC6P12956 609 aaKnown RBP eCLIP4.56□□□□□ -1.68
HERC4-204ENST00000395198 PTPN2P17706 415 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 AXLP30530 894 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 CSTF2P33240 577 aaKnown RBP eCLIP4.56□□□□□ -1.681e-6■■■□□ 19.1
HERC4-204ENST00000395198 PPP1R2P41236 205 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PHEXP78562 749 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MRPS15P82914 257 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 AUHQ13825 339 aaKnown RBP4.56□□□□□ -1.68
HERC4-204ENST00000395198 EFR3AQ14156 821 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 FAM209AQ5JX71 171 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PPP1R2P3Q6NXS1 205 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MIS18BP1Q6P0N0 1132 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 PPP1R21Q6ZMI0 780 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 NUTM1Q86Y26 1132 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 GOLM1Q8NBJ4 401 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 KCTD6Q8NC69 237 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 MYCBPAPQ8TBZ2 947 aa4.56□□□□□ -1.68
HERC4-204ENST00000395198 NUDCD1Q96RS6 583 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms