RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 TBC1D8BQ0IIM8 1120 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 ZC2HC1CQ53FD0 456 aaPredicted RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 CSGALNACT2Q8N6G5 542 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 BSNDQ8WZ55 320 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 MRFAP1L1Q96HT8 127 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 JPH2Q9BR39 696 aaPredicted RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 TRIM5Q9C035 493 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 MARK1Q9P0L2 795 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 LIMA1Q9UHB6 759 aaKnown RBP12.51□□□□□ -0.41
RTN1-203ENST00000395090 PHF24Q9UPV7 400 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 COL1A2P08123 1366 aa12.51□□□□□ -0.41
RTN1-203ENST00000395090 ARID2Q68CP9 1835 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 HAS3O00219 553 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 KPNA6O60684 536 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 FGFR1OPO95684 399 aaKnown RBP12.5□□□□□ -0.41
RTN1-203ENST00000395090 HMGCRP04035 888 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 ZNF286BP0CG31 522 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 ELNP15502 786 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 ABCD1P33897 745 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 SOX10P56693 466 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 C1QTNF8P60827 252 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 CCDC173Q0VFZ6 552 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 DMP1Q13316 513 aaPredicted RBP12.5□□□□□ -0.41
RTN1-203ENST00000395090 NFIL3Q16649 462 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 BRDTQ58F21 947 aaPredicted RBP12.5□□□□□ -0.41
RTN1-203ENST00000395090 TCP11X2Q5H9J9 407 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 LRRC55Q6ZSA7 311 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 HAUS6Q7Z4H7 955 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 NELFCDQ8IXH7 590 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 TMEM161BQ8NDZ6 487 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 KAT2BQ92831 832 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 TMEM143Q96AN5 459 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 LENG1Q96BZ8 264 aaPredicted RBP12.5□□□□□ -0.41
RTN1-203ENST00000395090 TSG101Q99816 390 aa12.5□□□□□ -0.41
RTN1-203ENST00000395090 POLR3FQ9H1D9 316 aaPredicted RBP12.5□□□□□ -0.41
RTN1-203ENST00000395090 TYW1Q9NV66 732 aaKnown RBP12.5□□□□□ -0.41
RTN1-203ENST00000395090 H0YCG3 227 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 MAGEB2O15479 319 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 C22orf31O95567 290 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 GLRA2P23416 452 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 EEF1GP26641 437 aaKnown RBP12.49□□□□□ -0.41
RTN1-203ENST00000395090 SPAG1Q07617 926 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 PPP2R5AQ15172 486 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 FSCN1Q16658 493 aaKnown RBP12.49□□□□□ -0.41
RTN1-203ENST00000395090 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.49□□□□□ -0.41
RTN1-203ENST00000395090 VWA5B2Q8N398 1253 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 RAET1EQ8TD07 263 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 TCP11Q8WWU5 503 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 HVCN1Q96D96 273 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 IFT74Q96LB3 600 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 NAP1L5Q96NT1 182 aaPredicted RBP12.49□□□□□ -0.41
RTN1-203ENST00000395090 CTAGE1Q96RT6 745 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 TMEM206Q9H813 350 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 IFNKQ9P0W0 207 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 ARHGAP28Q9P2N2 729 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 PCNTO95613 3336 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 MYH11P35749 1972 aa12.49□□□□□ -0.41
RTN1-203ENST00000395090 KCNJ18B7U540 433 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 SLC16A4O15374 487 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 SERPINC1P01008 464 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 RARBP10826 455 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 ZNF16P17020 682 aaPredicted RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 CDC25BP30305 580 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 NAMPTP43490 491 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 UBASH3AP57075 661 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 SNRPFP62306 86 aaKnown RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 DRP2Q13474 957 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 KCNJ12Q14500 433 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 MXD4Q14582 209 aaPredicted RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 NR1I3Q14994 352 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 HSP90AA4PQ58FG1 418 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 MARCH8Q5T0T0 291 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 SV2AQ7L0J3 742 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 FAM114A1Q8IWE2 563 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 LINC01465Q8N7H1 131 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 DNAJC5GQ8N7S2 189 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 GOLGA5Q8TBA6 731 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 ASAP3Q8TDY4 903 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 NANOS1Q8WY41 292 aaKnown RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 XPO4Q9C0E2 1151 aaKnown RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 KMT5AQ9NQR1 393 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 CGNQ9P2M7 1197 aaKnown RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 ZMYM2Q9UBW7 1377 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 RRN3P2A6NIE6 340 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 CCDC169A6NNP5 214 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 K7ENM7 598 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 CALUO43852 315 aaPredicted RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 TNFRSF21O75509 655 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 KLRC1P26715 233 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 CCND3P30281 292 aaPredicted RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 PURAQ00577 322 aaKnown RBP12.48□□□□□ -0.41
RTN1-203ENST00000395090 BEX3Q00994 111 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 ADAM9Q13443 819 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 CCINQ13939 588 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 MYBPC2Q14324 1141 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 KRT31Q15323 416 aa12.48□□□□□ -0.41
RTN1-203ENST00000395090 EFCAB12Q6NXP0 572 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms