RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CROCC2H7BZ55 1655 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 EIF3EP60228 445 aaKnown RBP10.98□□□□□ -0.65
COL4A6-203ENST00000394872 ANKS3Q6ZW76 656 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 OSBPL9Q96SU4 736 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 KIFC3Q9BVG8 833 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 ZNF197O14709 1029 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 CELF2O95319 508 aaKnown RBP10.98□□□□□ -0.65
COL4A6-203ENST00000394872 GMPSP49915 693 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-203ENST00000394872 SARM1Q6SZW1 724 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 MUC3BQ9H195 1237 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 AIPL1Q9NZN9 384 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 SFMBT1Q9UHJ3 866 aa10.98□□□□□ -0.65
COL4A6-203ENST00000394872 PFASO15067 1338 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 RTN2O75298 545 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 ENTPD3O75355 529 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 PDGFRBP09619 1106 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 GUCY1A2P33402 732 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 SREBF2Q12772 1141 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 CCDC137Q6PK04 289 aaKnown RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 MYOZ2Q9NPC6 264 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 MRPL40Q9NQ50 206 aaKnown RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 DOLKQ9UPQ8 538 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 PCDHB7Q9Y5E2 793 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 CLTCL1P53675 1640 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 KCNN4O15554 427 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 CETPP11597 493 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 MAP4P27816 1152 aaKnown RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 HIBCHQ6NVY1 386 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 TBC1D1Q86TI0 1168 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 NR1H4Q96RI1 486 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 KLHL11Q9NVR0 708 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 GRID2IPA4D2P6 1211 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 ZNF189O75820 626 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 OCM2P0CE71 109 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 OCMP0CE72 109 aaPredicted RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 GUCY2CP25092 1073 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 TRIML2Q8N7C3 387 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 GPRC5AQ8NFJ5 357 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 ARHGEF40Q8TER5 1519 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 SERPIND1P05546 499 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 MCF2P10911 925 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 KCNA2P16389 499 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 ARSEP51690 589 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 EMC2Q15006 297 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 SGMS1Q86VZ5 419 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 C18orf8Q96DM3 657 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 BTBD6Q96KE9 485 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 ASPSCR1Q9BZE9 553 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 SH3BP1Q9Y3L3 701 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 PDXKO00764 312 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 SLC16A3O15427 465 aaKnown RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 MAGEB2O15479 319 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 SLC25A27O95847 323 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 AARSP49588 968 aaKnown RBP eCLIP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 ARL4DP49703 201 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 HUNKP57058 714 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 PDIA5Q14554 519 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 MGAT5BQ3V5L5 792 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 IZUMO3Q5VZ72 239 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 STKLD1Q8NE28 680 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 PLA2G12BQ9BX93 195 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 SCAF8Q9UPN6 1271 aaKnown RBP10.97□□□□□ -0.65
COL4A6-203ENST00000394872 QRICH2Q9H0J4 1663 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 SPATA31A6Q5VVP1 1343 aa10.97□□□□□ -0.65
COL4A6-203ENST00000394872 ANO9A1A5B4 782 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 CD4P01730 458 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 LMNAP02545 664 aaKnown RBP10.96□□□□□ -0.65
COL4A6-203ENST00000394872 SCP2P22307 547 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 TYK2P29597 1187 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 OR1G1P47890 313 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 DEUP1Q05D60 604 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 IL31Q6EBC2 164 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 ATG9AQ7Z3C6 839 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 MFN1Q8IWA4 741 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 TBC1D19Q8N5T2 526 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 ATP11CQ8NB49 1132 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 ZNF512Q96ME7 567 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-203ENST00000394872 MED15Q96RN5 788 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 GPBP1L1Q9HC44 474 aaPredicted RBP10.96□□□□□ -0.65
COL4A6-203ENST00000394872 SYCE1LA8MT33 242 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 PFDN1O60925 122 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 PDXDC1Q6P996 788 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 NUDCD3Q8IVD9 361 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 GSPT2Q8IYD1 628 aaKnown RBP10.96□□□□□ -0.65
COL4A6-203ENST00000394872 MTBPQ96DY7 904 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 LRRC37BQ96QE4 947 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 EML4Q9HC35 981 aaKnown RBP10.96□□□□□ -0.65
COL4A6-203ENST00000394872 MLXIPLQ9NP71 852 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.96□□□□□ -0.65
COL4A6-203ENST00000394872 CLEC10AQ8IUN9 316 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 ATPAF2Q8N5M1 289 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 RFFLQ8WZ73 363 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 KDM4CQ9H3R0 1056 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 SLC38A7Q9NVC3 462 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 ADA2Q9NZK5 511 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 PRR12Q9ULL5 1215 aa10.96□□□□□ -0.65
COL4A6-203ENST00000394872 DDX5P17844 614 aaKnown RBP10.96□□□□□ -0.66
COL4A6-203ENST00000394872 NCOA4Q13772 614 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 STILQ15468 1287 aa10.96□□□□□ -0.66
COL4A6-203ENST00000394872 DGKDQ16760 1214 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms