RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 KRT5P13647 590 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 CDC25CP30307 473 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 RARRES1P49788 294 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 WDR78Q5VTH9 848 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 EEPD1Q7L9B9 569 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 ZNF653Q96CK0 615 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 PAGR1Q9BTK6 254 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 SIX2Q9NPC8 291 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 ABCF3Q9NUQ8 709 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 TELO2Q9Y4R8 837 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 EMSYQ7Z589 1322 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 PASKQ96RG2 1323 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 SKAP2O75563 359 aaPredicted RBP11.6□□□□□ -0.55
BRF1-204ENST00000392557 FAM47EQ6ZV65 393 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 DAW1Q8N136 415 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 ADAM33Q9BZ11 813 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 SLC24A3Q9HC58 644 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 GABBR1Q9UBS5 961 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 UBIAD1Q9Y5Z9 338 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 SYNGAP1Q96PV0 1343 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 PSME4Q14997 1843 aa11.6□□□□□ -0.55
BRF1-204ENST00000392557 ZMYM2Q9UBW7 1377 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 THAP12O43422 761 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 PPFIA2O75334 1257 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 CCNE2O96020 404 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 CALCAP01258 141 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 DHX34Q14147 1143 aaKnown RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 TMEM132BQ14DG7 1078 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 FAM182AQ5T1J6 154 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 GSTA5Q7RTV2 222 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 APOBEC3FQ8IUX4 373 aaKnown RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 RASGEF1CQ8N431 466 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 ZSWIM2Q8NEG5 633 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 SLC30A5Q8TAD4 765 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 CCT6BQ92526 530 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 STAMBPL1Q96FJ0 436 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 CBWD1Q9BRT8 395 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 TBC1D22BQ9NU19 505 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 PARP2Q9UGN5 583 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 COG5Q9UP83 839 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 FAM187AA6NFU0 413 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 SLC16A3O15427 465 aaKnown RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 PHF2O75151 1096 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 ECEL1O95672 775 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 CHRNA3P32297 505 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 ADCY8P40145 1251 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 GPC5P78333 572 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 ELF3P78545 371 aaPredicted RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 PREPLQ4J6C6 727 aaPredicted RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 SGO2Q562F6 1265 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 DUPD1Q68J44 220 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 SWSAP1Q6NVH7 229 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 SEPT14Q6ZU15 432 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 ANKRD35Q8N283 1001 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 EIF1ADQ8N9N8 165 aaKnown RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 C1orf131Q8NDD1 294 aaKnown RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 CEP170P1Q96L14 293 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 DDX23Q9BUQ8 820 aaKnown RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 HEMGNQ9BXL5 484 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 GPRC5DQ9NZD1 345 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 TRPC6Q9Y210 931 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 A0A0A6YYK5 440 aaPredicted RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 WDR64B1ANS9 1081 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 KIAA0391O15091 583 aaKnown RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 CLDN3O15551 220 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 SUN1O94901 812 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 UBOX5O94941 541 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 ATP6V1G2O95670 118 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 CCND2P30279 289 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 HIRAP54198 1017 aaPredicted RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 ACCSLQ4AC99 568 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 HP1BP3Q5SSJ5 553 aaPredicted RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 GADL1Q6ZQY3 521 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 RHOT2Q8IXI1 618 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 MICAL1Q8TDZ2 1067 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 ATP8B4Q8TF62 1192 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 ECT2Q9H8V3 914 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 NKIRAS1Q9NYS0 192 aa11.59□□□□□ -0.55
BRF1-204ENST00000392557 SEPT9Q9UHD8 586 aaPredicted RBP11.59□□□□□ -0.55
BRF1-204ENST00000392557 TCRBV7S2A1N4TA0A589 114 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 PODXLO00592 558 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 EIF3DO15371 548 aaKnown RBP eCLIP11.58□□□□□ -0.56
BRF1-204ENST00000392557 DDX3YO15523 660 aaKnown RBP11.58□□□□□ -0.56
BRF1-204ENST00000392557 PYGMP11217 842 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 PDE6CP51160 858 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 GSCP56915 257 aaPredicted RBP11.58□□□□□ -0.56
BRF1-204ENST00000392557 CYP4F22Q6NT55 531 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 HAUS6Q7Z4H7 955 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 RPAINQ86UA6 219 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 CPNE8Q86YQ8 564 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 SRRM1Q8IYB3 904 aaKnown RBP11.58□□□□□ -0.56
BRF1-204ENST00000392557 KAT5Q92993 513 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 SAAL1Q96ER3 474 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 NUP85Q9BW27 656 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 KDM4CQ9H3R0 1056 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 GGA2Q9UJY4 613 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 INTUQ9ULD6 942 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 STXBP5LQ9Y2K9 1186 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 TMEM120BA0PK00 339 aa11.58□□□□□ -0.56
BRF1-204ENST00000392557 ADM5C9JUS6 153 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms