RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 KIF4AO95239 1232 aa21.43■■□□□ 1.02
CSNK1D-203ENST00000392334 KRT14P02533 472 aa21.43■■□□□ 1.02
CSNK1D-203ENST00000392334 ZNF286BP0CG31 522 aa21.43■■□□□ 1.02
CSNK1D-203ENST00000392334 LAMC2Q13753 1193 aa21.43■■□□□ 1.02
CSNK1D-203ENST00000392334 KIF22Q14807 665 aa21.43■■□□□ 1.02
CSNK1D-203ENST00000392334 TARBP2Q15633 366 aaKnown RBP21.43■■□□□ 1.02
CSNK1D-203ENST00000392334 IFT74Q96LB3 600 aa21.43■■□□□ 1.02
CSNK1D-203ENST00000392334 TMEM206Q9H813 350 aa21.43■■□□□ 1.02
CSNK1D-203ENST00000392334 DNAH12Q6ZR08 3092 aa21.43■■□□□ 1.02
CSNK1D-203ENST00000392334 HMGB1P1B2RPK0 211 aaPredicted RBP21.42■■□□□ 1.02
CSNK1D-203ENST00000392334 PDCLQ13371 301 aa21.42■■□□□ 1.02
CSNK1D-203ENST00000392334 CUL1Q13616 776 aa21.42■■□□□ 1.02
CSNK1D-203ENST00000392334 LRRC71Q8N4P6 559 aa21.42■■□□□ 1.02
CSNK1D-203ENST00000392334 LRRC57Q8N9N7 239 aa21.42■■□□□ 1.02
CSNK1D-203ENST00000392334 ATP6V1G3Q96LB4 118 aa21.42■■□□□ 1.02
CSNK1D-203ENST00000392334 ESYT3A0FGR9 886 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 ANKRD63C9JTQ0 380 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 EXOC3O60645 756 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 AFPP02771 609 aaKnown RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 IGBP1P78318 339 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 PTK2Q05397 1052 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 PLPPR4Q7Z2D5 763 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 ZNF571Q7Z3V5 609 aaPredicted RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 FAM186BQ8IYM0 893 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 SH2D3CQ8N5H7 860 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 ATP8B4Q8TF62 1192 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 LENG1Q96BZ8 264 aaPredicted RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 NTPCRQ9BSD7 190 aaKnown RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 SMARCAD1Q9H4L7 1026 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 PACSIN2Q9UNF0 486 aaPredicted RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 ARID2Q68CP9 1835 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 RBM47A0AV96 593 aaKnown RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 LRRIQ4A6NIV6 560 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 ZBTB42B2RXF5 422 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 IGHA2P01877 340 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 XRCC5P13010 732 aaKnown RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 UCHL3P15374 230 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 GLRA2P23416 452 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 PSMC2P35998 433 aaKnown RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 ZNF296Q8WUU4 475 aaPredicted RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 TRIB2Q92519 343 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 ZNF668Q96K58 619 aaPredicted RBP21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 ST6GALNAC4Q9H4F1 302 aa21.41■■□□□ 1.02
CSNK1D-203ENST00000392334 A0A0A6YYK5 440 aaPredicted RBP21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 LGALS2P05162 132 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 NR1D1P20393 614 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 ARID5AQ03989 594 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 ALCAMQ13740 583 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 OLFML2BQ68BL8 750 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 SPIRE2Q8WWL2 714 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 RNPC3Q96LT9 517 aaKnown RBP21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 EPN3Q9H201 632 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 C17orf75Q9HAS0 396 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 DMAC2Q9NW81 257 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 NAGPAQ9UK23 515 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 INTUQ9ULD6 942 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 FRMD4BQ9Y2L6 1034 aa21.4■■□□□ 1.02
CSNK1D-203ENST00000392334 GOLGA8IPA6NC78 632 aa21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 GOLGA8JA6NMD2 632 aa21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 NDUFAB1O14561 156 aa21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 ERLIN2O94905 339 aa21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 ZNF865P0CJ78 1059 aaPredicted RBP21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 LSP1P33241 339 aa21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 SUGP1Q8IWZ8 645 aaKnown RBP21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 PPTC7Q8NI37 304 aa21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 FAM167AQ96KS9 214 aa21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 EMSYQ7Z589 1322 aa21.39■■□□□ 1.02
CSNK1D-203ENST00000392334 KCNK3O14649 394 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 SLC16A3O15427 465 aaKnown RBP21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 MAFO75444 373 aaPredicted RBP21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 GJB1P08034 283 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 PON1P27169 355 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 ECHS1P30084 290 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 ARL2P36404 184 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 GUCY2FP51841 1108 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 EXOC3L4Q17RC7 722 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 DUSP28Q4G0W2 176 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 ICE2Q659A1 982 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 KCTD16Q68DU8 428 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 TAS1R3Q7RTX0 852 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 SLFN11Q7Z7L1 901 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 MICALL1Q8N3F8 863 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 OR6J1Q8NGC5 347 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 PPP1R13LQ8WUF5 828 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 PRPF31Q8WWY3 499 aaKnown RBP21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 SPAG5Q96R06 1193 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 TMBIM4Q9HC24 238 aa21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 METTL14Q9HCE5 456 aaKnown RBP21.39■■□□□ 1.01
CSNK1D-203ENST00000392334 CCDC188H7C350 402 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 SLC9A1P19634 815 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 CNGA1P29973 690 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 ADSSP30520 456 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 RFC5P40937 340 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 DNA2P51530 1060 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 TNFAIP2Q03169 654 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 TRIM32Q13049 653 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 TTC19Q6DKK2 380 aaPredicted RBP21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 MAP4K3Q8IVH8 894 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 RASGEF1CQ8N431 466 aa21.38■■□□□ 1.01
CSNK1D-203ENST00000392334 SLC35C1Q96A29 364 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms