RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 MAN1B1Q9UKM7 699 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 TRAF3IP3Q9Y228 551 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 PCDHB12Q9Y5F1 795 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 TTC28Q96AY4 2481 aa12.98□□□□□ -0.33
PCNA-201ENST00000379143 C5orf67F2Z3F1 127 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 EXTL3O43909 919 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 POMCP01189 267 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 KCNE1P15382 129 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 PRCPP42785 496 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 ALDH7A1P49419 539 aaKnown RBP12.97□□□□□ -0.33
PCNA-201ENST00000379143 SCNN1GP51170 649 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 SEZ6Q53EL9 994 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 ALKAL1Q6UXT8 129 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 LRRC55Q6ZSA7 311 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 GPD1LQ8N335 351 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 XXYLT1Q8NBI6 393 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 GSTCDQ8NEC7 633 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 P2RX5Q93086 422 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 SYAP1Q96A49 352 aaPredicted RBP12.97□□□□□ -0.33
PCNA-201ENST00000379143 FAM213AQ9BRX8 229 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 TMEM175Q9BSA9 504 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 ASB7Q9H672 318 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 PRDM6Q9NQX0 595 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 SLC38A7Q9NVC3 462 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 HSPBP1Q9NZL4 362 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 CNTN3Q9P232 1028 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 MAPK8IP1Q9UQF2 711 aa12.97□□□□□ -0.33
PCNA-201ENST00000379143 TDRD15B5MCY1 1934 aaKnown RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 SMIM28A0A1B0GU29 152 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 TTC26A0AVF1 554 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 ZNF233A6NK53 670 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 BIN1O00499 593 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 PTGESO14684 152 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 PSMA7O14818 248 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 XPOTO43592 962 aaKnown RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 ZC3H11AO75152 810 aaKnown RBP eCLIP12.96□□□□□ -0.333e-7■□□□□ 10.2
PCNA-201ENST00000379143 IL18RAPO95256 599 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 ALDH2P05091 517 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 ADRB2P07550 413 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 LINC00271P0C7V0 271 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 CXCL8P10145 99 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 RPL13P26373 211 aaKnown RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 CTNNB1P35222 781 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 PPM1AP35813 382 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 BMPR1AP36894 532 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 TNFSF9P41273 254 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 ACOT2P49753 483 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 AFF1P51825 1210 aaKnown RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 ENOX2Q16206 610 aaKnown RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 NFIL3Q16649 462 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 SLC10A6Q3KNW5 377 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 EPC2Q52LR7 807 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 CCDC183Q5T5S1 534 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 ISM2Q6H9L7 571 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 CRELD2Q6UXH1 353 aaPredicted RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 SMYD4Q8IYR2 804 aaPredicted RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 ADSSL1Q8N142 457 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 MAFAQ8NHW3 353 aaPredicted RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 SAAL1Q96ER3 474 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 DHTKD1Q96HY7 919 aaPredicted RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 ZNF558Q96NG5 402 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 TSG101Q99816 390 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 C17orf80Q9BSJ5 609 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 C11orf84Q9BUA3 381 aaPredicted RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 SEMA6BQ9H3T3 888 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 PCIF1Q9H4Z3 704 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 MIOSQ9NXC5 875 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 RBAKQ9NYW8 714 aaPredicted RBP12.96□□□□□ -0.33
PCNA-201ENST00000379143 STK39Q9UEW8 545 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 DERAQ9Y315 318 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 CITO14578 2027 aa12.96□□□□□ -0.33
PCNA-201ENST00000379143 NLRC5Q86WI3 1866 aa12.96□□□□□ -0.34
PCNA-201ENST00000379143 CLIC2O15247 247 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 EXOC3O60645 756 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 DDHD2O94830 711 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 ARHGEF15O94989 841 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 CYP2J2P51589 502 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 BCAR1P56945 870 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 LRRC63Q05C16 580 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 DSC1Q08554 894 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 TUSC3Q13454 348 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 SURF1Q15526 300 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 KLHL40Q2TBA0 621 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 EDRF1Q3B7T1 1238 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 ZBTB41Q5SVQ8 909 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 CENPPQ6IPU0 288 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 KCNT2Q6UVM3 1135 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 NT5DC4Q86YG4 428 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 ZNF280BQ86YH2 543 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 BRSK2Q8IWQ3 736 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 COLGALT2Q8IYK4 626 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 MLKLQ8NB16 471 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 COLGALT1Q8NBJ5 622 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 FBXO22Q8NEZ5 403 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 ARNTL2Q8WYA1 636 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 FBXL18Q96ME1 805 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 UROC1Q96N76 676 aa12.95□□□□□ -0.34
PCNA-201ENST00000379143 PPP1R10Q96QC0 940 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms