RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 MAML1Q92585 1016 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 KIFAP3Q92845 792 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ALKBH8Q96BT7 664 aaKnown RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 SLC7A6OSQ96CW6 309 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ERP27Q96DN0 273 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ZBTB10Q96DT7 871 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 ANO3Q9BYT9 981 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 DMAP1Q9NPF5 467 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 AVENQ9NQS1 362 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-203ENST00000378778 TMOD4Q9NZQ9 345 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 PHTF1Q9UMS5 762 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 NAALADL1Q9UQQ1 740 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 CHKBQ9Y259 395 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 SSX2IPQ9Y2D8 614 aa8.75□□□□□ -1.01
PTPRR-203ENST00000378778 GAKO14976 1311 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 NPHP3-ACAD11A0A0J9YXS1 232 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 A8MUI8 341 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 SPOPO43791 374 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 FAM13AO94988 1023 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 CYP3A4P08684 503 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 SPATA31C1P0DKV0 1188 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 PYGMP11217 842 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 TSHRP16473 764 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 KRT72Q14CN4 511 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 TMEM154Q6P9G4 183 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 TRABD2AQ86V40 505 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 ADGRF4Q8IZF3 695 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 ANKLE1Q8NAG6 615 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 C10orf82Q8WW14 230 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 PSPC1Q8WXF1 523 aaKnown RBP8.74□□□□□ -1.01
PTPRR-203ENST00000378778 LZICQ8WZA0 190 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 NCSTNQ92542 709 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 CELF1Q92879 486 aaKnown RBP8.74□□□□□ -1.01
PTPRR-203ENST00000378778 ZHX3Q9H4I2 956 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 KANSL2Q9H9L4 492 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 CYLDQ9NQC7 956 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 DDX43Q9NXZ2 648 aaKnown RBP8.74□□□□□ -1.01
PTPRR-203ENST00000378778 ASIC3Q9UHC3 531 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 RABGAP1Q9Y3P9 1069 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 NFASCO94856 1347 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 TAF1P21675 1872 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 F8W8V4 182 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 TGDSO95455 350 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 CDK18Q07002 472 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 AP1B1Q10567 949 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 BFSP1Q12934 665 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 LRRC14Q15048 493 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 CCNG2Q16589 344 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 OR52E8Q6IFG1 317 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 C4orf50Q6ZRC1 276 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 NOP9Q86U38 636 aaKnown RBP8.74□□□□□ -1.01
PTPRR-203ENST00000378778 CCDC25Q86WR0 208 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 ZCCHC9Q8N567 271 aaKnown RBP8.74□□□□□ -1.01
PTPRR-203ENST00000378778 ZNF564Q8TBZ8 553 aaPredicted RBP8.74□□□□□ -1.01
PTPRR-203ENST00000378778 MGARPQ8TDB4 240 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 DCAF4Q8WV16 495 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 DHX38Q92620 1227 aaKnown RBP8.74□□□□□ -1.01
PTPRR-203ENST00000378778 KRT35Q92764 455 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 UBA5Q9GZZ9 404 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 SYNCQ9H7C4 482 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 PARVGQ9HBI0 331 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 STX18Q9P2W9 335 aaKnown RBP8.74□□□□□ -1.01
PTPRR-203ENST00000378778 NKX1-2Q9UD57 310 aaPredicted RBP8.74□□□□□ -1.01
PTPRR-203ENST00000378778 ANGPTL2Q9UKU9 493 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 SUGT1Q9Y2Z0 365 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 ZMYM2Q9UBW7 1377 aa8.74□□□□□ -1.01
PTPRR-203ENST00000378778 LOC102724428A0A0B4J2F2 783 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 A0A1W2PRG0 241 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 SIGLEC16A6NMB1 481 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 TP73O15350 636 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 ACSL3O95573 720 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 FOXN2P32314 431 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 CETN2P41208 172 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 CASP4P49662 377 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 SIK1P57059 783 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 CDR2Q01850 454 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 SLC34A1Q06495 639 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 CCDC6Q16204 474 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 TMCO4Q5TGY1 634 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 DRICH1Q6PGQ1 229 aaPredicted RBP8.73□□□□□ -1.01
PTPRR-203ENST00000378778 SLC17A8Q8NDX2 589 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 LMO3Q8TAP4 145 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 SMC6Q96SB8 1091 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 GORASP1Q9BQQ3 440 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 BTBD10Q9BSF8 475 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 FAM167BQ9BTA0 163 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 DCLK3Q9C098 648 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 MIS12Q9H081 205 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 NDUFA13Q9P0J0 144 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 ZFP69BQ9UJL9 534 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 C2CD2Q9Y426 696 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 RASA4BC9J798 803 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 SMAPO00193 183 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 EML1O00423 815 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 RASA4O43374 803 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 PENKP01210 267 aaPredicted RBP8.73□□□□□ -1.01
PTPRR-203ENST00000378778 SREBF1P36956 1147 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 BTDP43251 543 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 ITGA8P53708 1063 aa8.73□□□□□ -1.01
PTPRR-203ENST00000378778 GABPAQ06546 454 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms