RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 AMPD2Q01433 879 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 CAP1Q01518 475 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 HIC1Q14526 733 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 MFSD10Q14728 455 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 ZNF568Q3ZCX4 644 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 C10orf76Q5T2E6 689 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 NFRKBQ6P4R8 1299 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 VPS36Q86VN1 386 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 FAM71AQ8IYT1 594 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 ERO1AQ96HE7 468 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 MAP7D2Q96T17 732 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 CDT1Q9H211 546 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 HAS3O00219 553 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 ENC1O14682 589 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 ZC3H11AO75152 810 aaKnown RBP eCLIP18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 TOMM70O94826 608 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 ALDH1A1P00352 501 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 CPT1AP50416 773 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 SCARA3Q6AZY7 606 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 GLYCTKQ8IVS8 523 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 CEP120Q8N960 986 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 TRIB2Q92519 343 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 CARD6Q9BX69 1037 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 AP5M1Q9H0R1 490 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 NRCAMQ92823 1304 aa18.73■□□□□ 0.59
THUMPD2-201ENST00000378727 ATP1A1P05023 1023 aaKnown RBP18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 NOGQ13253 232 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 BIRC3Q13489 604 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 THNSL1Q8IYQ7 743 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 SLC20A1Q8WUM9 679 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 NLRP7Q8WX94 980 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 CDC23Q9UJX2 597 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 MBLAC1A4D2B0 266 aaPredicted RBP18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 GPR25O00155 361 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 ZEB2O60315 1214 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 MYL3P08590 195 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 AKR1A1P14550 325 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 PIK3CAP42336 1068 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 FLT3LGP49771 235 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 PSEN2P49810 448 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 TMEM132AQ24JP5 1023 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 PALB2Q86YC2 1186 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 TRIM58Q8NG06 486 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 U2AF1L4Q8WU68 220 aaKnown RBP18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 HDAC6Q9UBN7 1215 aa18.72■□□□□ 0.59
THUMPD2-201ENST00000378727 TRIP12Q14669 1992 aaPredicted RBP18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 BUB1O43683 1085 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 TACC1O75410 805 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 TFRCP02786 760 aaKnown RBP18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 CYBAP13498 195 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 USP8P40818 1118 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 ADAM17P78536 824 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 GCNT1Q02742 428 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 WDR49Q8IV35 697 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 TMEM192Q8IY95 271 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 RNF10Q8N5U6 811 aaKnown RBP18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 DHX38Q92620 1227 aaKnown RBP18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 AGPAT1Q99943 283 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 PDZD7Q9H5P4 517 aa18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 V9GYY5 206 aaPredicted RBP18.71■□□□□ 0.59
THUMPD2-201ENST00000378727 CYP26A1O43174 497 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 SGPL1O95470 568 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 ARF4P18085 180 aaPredicted RBP18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 OSTNP61366 133 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 NCBP1Q09161 790 aaKnown RBP18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 FSCN1Q16658 493 aaKnown RBP18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 PAPD7Q5XG87 772 aaKnown RBP18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 SPOPLQ6IQ16 392 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 TRAPPC11Q7Z392 1133 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 ZNF410Q86VK4 478 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 CPB2Q96IY4 423 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 NOX5Q96PH1 765 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 ARID3AQ99856 593 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 FAM49AQ9H0Q0 323 aaPredicted RBP18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 ADAMTS10Q9H324 1103 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 ACP6Q9NPH0 428 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 C1orf112Q9NSG2 853 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 ATP8B3O60423 1300 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 ANO9A1A5B4 782 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 MYADML2A6NDP7 307 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 BTNL10A8MVZ5 291 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 PRKCZQ05513 592 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 KIZQ2M2Z5 673 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 RUFY4Q6ZNE9 571 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 EPS8L1Q8TE68 723 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 FAM212AQ96EL1 285 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 CAPNS2Q96L46 248 aa18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 APOBEC3GQ9HC16 384 aaKnown RBP18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 NOCTQ9UK39 431 aaKnown RBP18.7■□□□□ 0.58
THUMPD2-201ENST00000378727 TSPAN1O60635 241 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 DUSP11O75319 330 aaKnown RBP18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 TNFAIP3P21580 790 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 TMEM62Q0P6H9 643 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 TUBB2AQ13885 445 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 WDR44Q5JSH3 913 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 SRGAP1Q7Z6B7 1085 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 NOP9Q86U38 636 aaKnown RBP18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 SLC47A2Q86VL8 602 aa18.69■□□□□ 0.58
THUMPD2-201ENST00000378727 SCLT1Q96NL6 688 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms