RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ARFGEF2Q9Y6D5 1785 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 ARHGEF37A1IGU5 675 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 SPDYE16A6NNV3 312 aaPredicted RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 ADAMTS3O15072 1205 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 APBA1Q02410 837 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 TMEM132DQ14C87 1099 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 GLE1Q53GS7 698 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 HHATQ5VTY9 493 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 EMBQ6PCB8 327 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 GOLGA8KD6RF30 607 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 OGTO15294 1046 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 TOM1L1O75674 476 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 CLNS1AP54105 237 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 RBP5P82980 135 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 CDC42EP1Q00587 391 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 SPATA20Q8TB22 786 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 TAS1R2Q8TE23 839 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 P3H4Q92791 437 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 DIS3Q9Y2L1 958 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 UBIAD1Q9Y5Z9 338 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 LOC102724159A0A0B4J2E5 919 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 H3BRB1 525 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 SPATA31C1P0DKV0 1188 aa15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 BASP1P80723 227 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 PWP2Q15269 919 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 DARS2Q6PI48 645 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 RNPC3Q96LT9 517 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 MYCBPQ99417 103 aaPredicted RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 TUT1Q9H6E5 874 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-203ENST00000378679 RPSAP08865 295 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 GARTP22102 1010 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 ECM1Q16610 540 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 KYAT1Q16773 422 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 FAM102AQ5T9C2 384 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 SV2AQ7L0J3 742 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 CCDC60Q8IWA6 550 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 WHAMMQ8TF30 809 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 SLC35C1Q96A29 364 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 NOC2LQ9Y3T9 749 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 NID2Q14112 1375 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 POC1B-GALNT4F8VUJ3 575 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 PEX19P40855 299 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 ERVK-9P63128 1117 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 ATP8B4Q8TF62 1192 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 RBM41Q96IZ5 413 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 CAPS2Q9BXY5 557 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 SMARCAL1Q9NZC9 954 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 RIPK3Q9Y572 518 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 TCHHQ07283 1943 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 RRN3P2A6NIE6 340 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 EGFRP00533 1210 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 PLA2G4AP47712 749 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 YWHAGP61981 247 aaKnown RBP eCLIP15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 CABS1Q96KC9 395 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 KATNAL1Q9BW62 490 aa15.1■□□□□ 0.01
SHROOM1-203ENST00000378679 PLA2G6O60733 806 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 TJP3O95049 919 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 INSRRP14616 1297 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 ADORA2AP29274 412 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 SDC4P31431 198 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 PHBP35232 272 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 PTGER2P43116 358 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 SLC26A2P50443 739 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 KIZQ2M2Z5 673 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 ICE2Q659A1 982 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 MMS22LQ6ZRQ5 1243 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 RIOX2Q8IUF8 465 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 TTC39CQ8N584 583 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 TRAPPC12Q8WVT3 735 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 INTS13Q9NVM9 706 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 AMACRQ9UHK6 382 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 ATMINO43313 823 aaPredicted RBP15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 ADORA2BP29275 332 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 SLCO1A2P46721 670 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 RHOT1Q8IXI2 618 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 SSX2IPQ9Y2D8 614 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 TISP43B9A030 160 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 STRNO43815 780 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 VSNL1P62760 191 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 TBX2Q13207 712 aaPredicted RBP15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 CUL1Q13616 776 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 C18orf8Q96DM3 657 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 LRRC1Q9BTT6 524 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 TRIM7Q9C029 511 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 NIF3L1Q9GZT8 377 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 WNT8AQ9H1J5 351 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 PLIN4Q96Q06 1357 aa15.09■□□□□ 0.01
SHROOM1-203ENST00000378679 PODXLO00592 558 aa15.08■□□□□ 0.01
SHROOM1-203ENST00000378679 VTNP04004 478 aa15.08■□□□□ 0.01
SHROOM1-203ENST00000378679 CLTAP09496 248 aa15.08■□□□□ 0.01
SHROOM1-203ENST00000378679 MYBL1P10243 752 aa15.08■□□□□ 0.01
SHROOM1-203ENST00000378679 PPIL2Q13356 520 aa15.08■□□□□ 0.01
SHROOM1-203ENST00000378679 MYBPC2Q14324 1141 aa15.08■□□□□ 0.01
SHROOM1-203ENST00000378679 SLC35G1Q2M3R5 365 aa15.08■□□□□ 0.01
SHROOM1-203ENST00000378679 PARVAQ9NVD7 372 aa15.08■□□□□ 0.01
SHROOM1-203ENST00000378679 IP6K2Q9UHH9 426 aa15.08■□□□□ 0.01
SHROOM1-203ENST00000378679 PIK3R2O00459 728 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms