RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 COLGALT2Q8IYK4 626 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 GUF1Q8N442 669 aaKnown RBP14.43□□□□□ -0.1
CKAP2-202ENST00000378034 TMEM174Q8WUU8 243 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 GAS2L1Q99501 681 aaPredicted RBP14.43□□□□□ -0.1
CKAP2-202ENST00000378034 LMAN2LQ9H0V9 348 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 IKZF4Q9H2S9 585 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 RPF1Q9H9Y2 349 aaKnown RBP14.43□□□□□ -0.1
CKAP2-202ENST00000378034 SLC38A7Q9NVC3 462 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 SPG21Q9NZD8 308 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 HCSTQ9UBK5 93 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 STK39Q9UEW8 545 aa14.43□□□□□ -0.1
CKAP2-202ENST00000378034 SMIM28A0A1B0GU29 152 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 EPOPA6NHQ4 379 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 TGFB1I1O43294 461 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 GALTP07902 379 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 TUSC3Q13454 348 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 ZNF658Q5TYW1 1059 aaPredicted RBP14.42□□□□□ -0.1
CKAP2-202ENST00000378034 C12orf56Q8IXR9 622 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 KLHL23Q8NBE8 558 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 GUCD1Q96NT3 240 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 PPP1R10Q96QC0 940 aaKnown RBP14.42□□□□□ -0.1
CKAP2-202ENST00000378034 CDX2Q99626 313 aaPredicted RBP14.42□□□□□ -0.1
CKAP2-202ENST00000378034 KIAA1586Q9HCI6 787 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 AGPAT3Q9NRZ7 376 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 PLAGL2Q9UPG8 496 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 LZTS1Q9Y250 596 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 COL4A4P53420 1690 aaPredicted RBP14.42□□□□□ -0.1
CKAP2-202ENST00000378034 TTC26A0AVF1 554 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 PDXKO00764 312 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 EXTL3O43909 919 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 KRT17Q04695 432 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 PPP2R3AQ06190 1150 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 ENOX2Q16206 610 aaKnown RBP14.42□□□□□ -0.1
CKAP2-202ENST00000378034 PTPROQ16827 1216 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 SEZ6Q53EL9 994 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 SLC39A11Q8N1S5 342 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 CBWD1Q9BRT8 395 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 DNAJB4Q9UDY4 337 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 FAN1Q9Y2M0 1017 aa14.42□□□□□ -0.1
CKAP2-202ENST00000378034 TRIP11Q15643 1979 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 LPXNO60711 386 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 FGF18O76093 207 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 CXCL8P10145 99 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 TNFSF9P41273 254 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 SLC11A1P49279 550 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 ACOT2P49753 483 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 NAB2Q15742 525 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 ZBTB41Q5SVQ8 909 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 GPD1LQ8N335 351 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 UROC1Q96N76 676 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 COLEC11Q9BWP8 271 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 KCTD10Q9H3F6 313 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 CLSTN2Q9H4D0 955 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 ASB7Q9H672 318 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 PUF60Q9UHX1 559 aaKnown RBP14.41□□□□□ -0.1
CKAP2-202ENST00000378034 DERAQ9Y315 318 aa14.41□□□□□ -0.1
CKAP2-202ENST00000378034 PDCD11Q14690 1871 aaKnown RBP14.41□□□□□ -0.1
CKAP2-202ENST00000378034 XPOTO43592 962 aaKnown RBP14.4□□□□□ -0.1
CKAP2-202ENST00000378034 IL18RAPO95256 599 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 ITGB1P05556 798 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 PPP1R2P41236 205 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 MYBPC2Q14324 1141 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 CRELD2Q6UXH1 353 aaPredicted RBP14.4□□□□□ -0.1
CKAP2-202ENST00000378034 SLC9A9Q8IVB4 645 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 SPPL3Q8TCT6 385 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 GDPD5Q8WTR4 605 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 TMEM169Q96HH4 297 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 IGSF21Q96ID5 467 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 FAM213AQ9BRX8 229 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 CXCL16Q9H2A7 254 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 HSPBP1Q9NZL4 362 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 TRAF3IP3Q9Y228 551 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 LACTBL1A8MY62 500 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 RFXAPO00287 272 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 NRP1O14786 923 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 MEFVO15553 781 aaPredicted RBP14.4□□□□□ -0.1
CKAP2-202ENST00000378034 CALUO43852 315 aaPredicted RBP14.4□□□□□ -0.1
CKAP2-202ENST00000378034 B4GALT3O60512 393 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 MBD3O95983 291 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 OR1G1P47890 313 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 NT5DC4Q86YG4 428 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 TRIML1Q8N9V2 468 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 XXYLT1Q8NBI6 393 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 MYLIPQ8WY64 445 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 ERCC4Q92889 916 aaPredicted RBP14.4□□□□□ -0.1
CKAP2-202ENST00000378034 MRPL38Q96DV4 380 aaKnown RBP14.4□□□□□ -0.1
CKAP2-202ENST00000378034 DDX27Q96GQ7 796 aaKnown RBP14.4□□□□□ -0.1
CKAP2-202ENST00000378034 FBXL18Q96ME1 805 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 PCIF1Q9H4Z3 704 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 KIAA1468Q9P260 1216 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 MAN1B1Q9UKM7 699 aa14.4□□□□□ -0.1
CKAP2-202ENST00000378034 PLXNA4Q9HCM2 1894 aa14.39□□□□□ -0.11
CKAP2-202ENST00000378034 ZNF233A6NK53 670 aa14.39□□□□□ -0.11
CKAP2-202ENST00000378034 GRM6O15303 877 aa14.39□□□□□ -0.11
CKAP2-202ENST00000378034 CYP3A5P20815 502 aa14.39□□□□□ -0.11
CKAP2-202ENST00000378034 NFIL3Q16649 462 aa14.39□□□□□ -0.11
CKAP2-202ENST00000378034 GLRA4Q5JXX5 417 aa14.39□□□□□ -0.11
CKAP2-202ENST00000378034 PDE12Q6L8Q7 609 aaKnown RBP14.39□□□□□ -0.11
CKAP2-202ENST00000378034 BRSK2Q8IWQ3 736 aa14.39□□□□□ -0.11
CKAP2-202ENST00000378034 SAAL1Q96ER3 474 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms