RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 TRAF3IP3Q9Y228 551 aa21.69■■□□□ 1.06
DDR1-228ENST00000376575 SMIM28A0A1B0GU29 152 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 PDXKO00764 312 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 EXTL3O43909 919 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 KIF20AO95235 890 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 LDHAP00338 332 aaKnown RBP21.68■■□□□ 1.06
DDR1-228ENST00000376575 CXCL8P10145 99 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 PRCPP42785 496 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 GRIN2CQ14957 1233 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 NFIL3Q16649 462 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 SLC9A9Q8IVB4 645 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 SMYD4Q8IYR2 804 aaPredicted RBP21.68■■□□□ 1.06
DDR1-228ENST00000376575 COLGALT1Q8NBJ5 622 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 GOLGA5Q8TBA6 731 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 TMEM175Q9BSA9 504 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 DMAC2Q9NW81 257 aa21.68■■□□□ 1.06
DDR1-228ENST00000376575 CARNS1A5YM72 827 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 H3BNC9 293 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 LPXNO60711 386 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 MBD3O95983 291 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 THP07101 528 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 GALTP07902 379 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 ACOT2P49753 483 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 BCAR1P56945 870 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 ZBTB6Q15916 424 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 ZCWPW2Q504Y3 356 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 ARMCX5Q6P1M9 558 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 KCNT2Q6UVM3 1135 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 RBM43Q6ZSC3 357 aaKnown RBP21.67■■□□□ 1.06
DDR1-228ENST00000376575 HS2ST1Q7LGA3 356 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 ADSSL1Q8N142 457 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 TRIML1Q8N9V2 468 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 RPS6KC1Q96S38 1066 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 TSPAN18Q96SJ8 248 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 NUP62CLQ9H1M0 184 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 AAASQ9NRG9 546 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 HSPBP1Q9NZL4 362 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 DNAJB4Q9UDY4 337 aa21.67■■□□□ 1.06
DDR1-228ENST00000376575 RNASELQ05823 741 aaKnown RBP21.66■■□□□ 1.06
DDR1-228ENST00000376575 MYBPC2Q14324 1141 aa21.66■■□□□ 1.06
DDR1-228ENST00000376575 Q7L0L9 218 aa21.66■■□□□ 1.06
DDR1-228ENST00000376575 CD302Q8IX05 232 aa21.66■■□□□ 1.06
DDR1-228ENST00000376575 GPD1LQ8N335 351 aa21.66■■□□□ 1.06
DDR1-228ENST00000376575 ARNTL2Q8WYA1 636 aa21.66■■□□□ 1.06
DDR1-228ENST00000376575 SAAL1Q96ER3 474 aa21.66■■□□□ 1.06
DDR1-228ENST00000376575 RPF1Q9H9Y2 349 aaKnown RBP21.66■■□□□ 1.06
DDR1-228ENST00000376575 CERS4Q9HA82 394 aa21.66■■□□□ 1.06
DDR1-228ENST00000376575 MTMR10Q9NXD2 777 aa21.66■■□□□ 1.06
DDR1-228ENST00000376575 MAPK8IP1Q9UQF2 711 aa21.66■■□□□ 1.06
DDR1-228ENST00000376575 LACTBL1A8MY62 500 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 CLIC2O15247 247 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 EFEMP2O95967 443 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 CTNNB1P35222 781 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 SLC11A1P49279 550 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 PLCB3Q01970 1234 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 TUSC3Q13454 348 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 CENPPQ6IPU0 288 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 BRSK2Q8IWQ3 736 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 SLC39A11Q8N1S5 342 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 DEFB123Q8N688 67 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 FBXO22Q8NEZ5 403 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 ZNF558Q96NG5 402 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 FAM213AQ9BRX8 229 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 PCIF1Q9H4Z3 704 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 ASB7Q9H672 318 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 KIAA1586Q9HCI6 787 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 MTUS1Q9ULD2 1270 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 PCDHB12Q9Y5F1 795 aa21.65■■□□□ 1.06
DDR1-228ENST00000376575 COL4A4P53420 1690 aaPredicted RBP21.64■■□□□ 1.05
DDR1-228ENST00000376575 PPP1R3GB7ZBB8 358 aa21.64■■□□□ 1.05
DDR1-228ENST00000376575 ZC3H11AO75152 810 aaKnown RBP eCLIP21.64■■□□□ 1.05
DDR1-228ENST00000376575 CD44P16070 742 aaKnown RBP21.64■■□□□ 1.05
DDR1-228ENST00000376575 POU3F3P20264 500 aaPredicted RBP21.64■■□□□ 1.05
DDR1-228ENST00000376575 ALDH7A1P49419 539 aaKnown RBP21.64■■□□□ 1.05
DDR1-228ENST00000376575 GLRA4Q5JXX5 417 aa21.64■■□□□ 1.05
DDR1-228ENST00000376575 TMEM173Q86WV6 379 aaPredicted RBP21.64■■□□□ 1.05
DDR1-228ENST00000376575 KLHL23Q8NBE8 558 aa21.64■■□□□ 1.05
DDR1-228ENST00000376575 XXYLT1Q8NBI6 393 aa21.64■■□□□ 1.05
DDR1-228ENST00000376575 GUCD1Q96NT3 240 aa21.64■■□□□ 1.05
DDR1-228ENST00000376575 FAM193BQ96PV7 902 aaPredicted RBP21.64■■□□□ 1.05
DDR1-228ENST00000376575 C11orf84Q9BUA3 381 aaPredicted RBP21.64■■□□□ 1.05
DDR1-228ENST00000376575 DERAQ9Y315 318 aa21.64■■□□□ 1.05
DDR1-228ENST00000376575 PLXNA4Q9HCM2 1894 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 NRP1O14786 923 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 ALDH2P05091 517 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 ITGB1P05556 798 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 PPM1AP35813 382 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 PBX3P40426 434 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 PPP1R2P41236 205 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 WNT7BP56706 349 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 PPP2R3AQ06190 1150 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 SOX4Q06945 474 aaPredicted RBP21.63■■□□□ 1.05
DDR1-228ENST00000376575 SPOUT1Q5T280 376 aaKnown RBP21.63■■□□□ 1.05
DDR1-228ENST00000376575 ISM2Q6H9L7 571 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 FOXR2Q6PJQ5 311 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 CBWD2Q8IUF1 395 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 SPPL3Q8TCT6 385 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 PRDM12Q9H4Q4 367 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 SLC38A7Q9NVC3 462 aa21.63■■□□□ 1.05
DDR1-228ENST00000376575 SPG21Q9NZD8 308 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms