RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 FAM205CA6NFA0 338 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 BTBD18B2RXH4 712 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 MARCH6O60337 910 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 GCFC2P16383 781 aaKnown RBP14.53□□□□□ -0.08
CLCN6-205ENST00000376492 ARL2P36404 184 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 NR5A1Q13285 461 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 PSMD5Q16401 504 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 SLC44A4Q53GD3 710 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 PPM1LQ5SGD2 360 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 LIN9Q5TKA1 542 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 FAM171A1Q5VUB5 890 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 SLC27A1Q6PCB7 646 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 CEP57Q86XR8 500 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 DIS3L2Q8IYB7 885 aaKnown RBP14.53□□□□□ -0.08
CLCN6-205ENST00000376492 LNX1Q8TBB1 728 aaPredicted RBP14.53□□□□□ -0.08
CLCN6-205ENST00000376492 NAP1L4Q99733 375 aaKnown RBP14.53□□□□□ -0.08
CLCN6-205ENST00000376492 TTPALQ9BTX7 342 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 BCO2Q9BYV7 579 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 CXCL16Q9H2A7 254 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 HCFC1R1Q9NWW0 138 aa14.53□□□□□ -0.08
CLCN6-205ENST00000376492 ARID2Q68CP9 1835 aa14.52□□□□□ -0.08
CLCN6-205ENST00000376492 A0A087WWV3 80 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 FAM170BA6NMN3 283 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 TBX3O15119 743 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 LAMTOR5O43504 91 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 SLITRK3O94933 977 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 HNRNPA1P09651 372 aaKnown RBP eCLIP14.52□□□□□ -0.09
CLCN6-205ENST00000376492 CSTF1Q05048 431 aaKnown RBP14.52□□□□□ -0.09
CLCN6-205ENST00000376492 TUSC3Q13454 348 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 BECN1Q14457 450 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 VARS2Q5ST30 1063 aaKnown RBP14.52□□□□□ -0.09
CLCN6-205ENST00000376492 FAM184AQ8NB25 1140 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 FBXO18Q8NFZ0 1043 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 SLC7A14Q8TBB6 771 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 ING5Q8WYH8 240 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 PIK3R5Q8WYR1 880 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 C8orf76Q96K31 380 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 CNTNAP3BQ96NU0 1288 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 CNTNAP3Q9BZ76 1288 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 POLR3FQ9H1D9 316 aaPredicted RBP14.52□□□□□ -0.09
CLCN6-205ENST00000376492 LTB4R2Q9NPC1 389 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 NCDNQ9UBB6 729 aa14.52□□□□□ -0.09
CLCN6-205ENST00000376492 FANCMQ8IYD8 2048 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 ZMYM2Q9UBW7 1377 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 SPTBN2O15020 2390 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 CACNA1BQ00975 2339 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 A0A1B0GUA9 196 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 TTLL13PA6NNM8 815 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 PTGESO14684 152 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 SPTLC1O15269 473 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 KRT37O76014 449 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 IGFBP6P24592 240 aaPredicted RBP14.51□□□□□ -0.09
CLCN6-205ENST00000376492 PRKCQQ04759 706 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 POU5F1BQ06416 359 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 SAFBQ15424 915 aaKnown RBP eCLIP14.51□□□□□ -0.09
CLCN6-205ENST00000376492 ZNF528Q3MIS6 628 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 TSSK4Q6SA08 328 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 MTSS1LQ765P7 747 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 NPAS3Q8IXF0 933 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 EIF2AK1Q9BQI3 630 aaKnown RBP14.51□□□□□ -0.09
CLCN6-205ENST00000376492 NFKBIZQ9BYH8 718 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 GPRC5CQ9NQ84 441 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 FBXO4Q9UKT5 387 aa14.51□□□□□ -0.09
CLCN6-205ENST00000376492 TDRD15B5MCY1 1934 aaKnown RBP14.51□□□□□ -0.09
CLCN6-205ENST00000376492 ZFHX4Q86UP3 3567 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 USO1O60763 962 aaKnown RBP14.5□□□□□ -0.09
CLCN6-205ENST00000376492 XYLBO75191 536 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 DGAT1O75907 488 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 TARSP26639 723 aaKnown RBP14.5□□□□□ -0.09
CLCN6-205ENST00000376492 HOXA9P31269 272 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 RARRES1P49788 294 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 FOSBP53539 338 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 AXDND1Q5T1B0 1012 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-205ENST00000376492 TPRG1Q6ZUI0 275 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 MAEAQ7L5Y9 396 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 PIGOQ8TEQ8 1089 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 ATRIPQ8WXE1 791 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 HSD17B14Q9BPX1 270 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 FOXP1Q9H334 677 aaPredicted RBP14.5□□□□□ -0.09
CLCN6-205ENST00000376492 DNMT3BQ9UBC3 853 aaKnown RBP14.5□□□□□ -0.09
CLCN6-205ENST00000376492 SMG5Q9UPR3 1016 aaKnown RBP14.5□□□□□ -0.09
CLCN6-205ENST00000376492 USP20Q9Y2K6 914 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 PCDHGA2Q9Y5H1 932 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 MYH15Q9Y2K3 1946 aa14.5□□□□□ -0.09
CLCN6-205ENST00000376492 DOCK6Q96HP0 2047 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 LRRIQ4A6NIV6 560 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 RECQL4O94761 1208 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 LYPLA2O95372 231 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 PFKPQ01813 784 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 GUCY1B3Q02153 619 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 NAB2Q15742 525 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 PABPC1LQ4VXU2 614 aaKnown RBP14.49□□□□□ -0.09
CLCN6-205ENST00000376492 POTEHQ6S545 545 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 RSPO2Q6UXX9 243 aaPredicted RBP14.49□□□□□ -0.09
CLCN6-205ENST00000376492 SLFN12Q8IYM2 578 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 ZBTB44Q8NCP5 570 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 CCDC43Q96MW1 224 aaKnown RBP14.49□□□□□ -0.09
CLCN6-205ENST00000376492 IPO9Q96P70 1041 aaKnown RBP14.49□□□□□ -0.09
CLCN6-205ENST00000376492 OSBPL6Q9BZF3 934 aa14.49□□□□□ -0.09
CLCN6-205ENST00000376492 PLA2G2FQ9BZM2 168 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms