RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CFAP73A6NFT4 308 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 RTN2O75298 545 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 KRT16P08779 473 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 ICA1Q05084 483 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 RIPK1Q13546 671 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 MFSD5Q6N075 450 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 RNF207Q6ZRF8 634 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 PAXIP1Q6ZW49 1069 aaPredicted RBP15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 TRPM4Q8TD43 1214 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 NUP85Q9BW27 656 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 EBF2Q9HAK2 575 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 RNF181Q9P0P0 153 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 NYAP2Q9P242 653 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 PGAP2Q9UHJ9 254 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 MTUS1Q9ULD2 1270 aa15.12■□□□□ 0.01
CLCNKA-202ENST00000375692 CYP26A1O43174 497 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 PSMD10O75832 226 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 CFBP00751 764 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 RPS12P25398 132 aaKnown RBP15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 CDC25CP30307 473 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 GBP1P32455 592 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 CALCOCO2Q13137 446 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 CYP1B1Q16678 543 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 GALNTL6Q49A17 601 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 DLK2Q6UY11 383 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 CROCCP2Q86T23 111 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 SLC47A2Q86VL8 602 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 ATG4AQ8WYN0 398 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 WNT8AQ9H1J5 351 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 TUFT1Q9NNX1 390 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 FZD1Q9UP38 647 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 SKAP2O75563 359 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 ECEL1O95672 775 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 ZNF131P52739 623 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 MAP2K1Q02750 393 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 KRT17Q04695 432 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 KYNUQ16719 465 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 ABCB5Q2M3G0 1257 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 ZNF568Q3ZCX4 644 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 CRELD2Q6UXH1 353 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 CYP4X1Q8N118 509 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 FITM2Q8N6M3 262 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 ZNF564Q8TBZ8 553 aaPredicted RBP15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 KLHL29Q96CT2 875 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 CBWD1Q9BRT8 395 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 TBK1Q9UHD2 729 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 HACL1Q9UJ83 578 aa15.11■□□□□ 0.01
CLCNKA-202ENST00000375692 HIP1RO75146 1068 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 GGPS1O95749 300 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 HIRAP54198 1017 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 COPS2P61201 443 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 CYFIP1Q7L576 1253 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 DAW1Q8N136 415 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 PLEKHO2Q8TD55 490 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 EPS8L1Q8TE68 723 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 L3MBTL3Q96JM7 780 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 RUNDC3BQ96NL0 473 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 ROPN1BQ9BZX4 212 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 ROPN1Q9HAT0 212 aaPredicted RBP15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 ASIC3Q9UHC3 531 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 C15orf41Q9Y2V0 281 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 A0A1B0GUA9 196 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 SUN1O94901 812 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 CALCAP01258 141 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 CYP3A4P08684 503 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 VPS41P49754 854 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 VAMP7P51809 220 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 BNIP1Q12981 228 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 CRYMQ14894 314 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 C1orf220Q5T0J3 134 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 TRMT10CQ7L0Y3 403 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 RSRC1Q96IZ7 334 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 RMDN2Q96LZ7 410 aa15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 NOCTQ9UK39 431 aaKnown RBP15.1■□□□□ 0.01
CLCNKA-202ENST00000375692 MYH11P35749 1972 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 GAS7O60861 476 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 DIAPH2O60879 1101 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 STXBP4Q6ZWJ1 553 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 SPATA21Q7Z572 469 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 PHLDB2Q86SQ0 1253 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 FMNL3Q8IVF7 1028 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 SH2D3AQ9BRG2 576 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 UNC45AQ9H3U1 944 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 CHST7Q9NS84 486 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 GPRC5DQ9NZD1 345 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 SEL1LQ9UBV2 794 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 A0A1W2PRG0 241 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 K7ENM7 598 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 DDX39AO00148 427 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 ARP10275 920 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 CETPP11597 493 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 BRAFP15056 766 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 RWDD2BP57060 319 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 TCEAL1Q15170 157 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 EPC2Q52LR7 807 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 SGO2Q562F6 1265 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 TEX2Q8IWB9 1127 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 PPM1KQ8N3J5 372 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 ZNF653Q96CK0 615 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 KREMEN1Q96MU8 473 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms