RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 MOXD1Q6UVY6 613 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 CDR2LQ86X02 465 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-204ENST00000375290 KIAA2013Q8IYS2 634 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 KLHL4Q9C0H6 718 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 CD209Q9NNX6 404 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 PAK5Q9P286 719 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 RSL24D1Q9UHA3 163 aaKnown RBP10.74□□□□□ -0.69
PTCH1-204ENST00000375290 TESPA1A2RU30 521 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-204ENST00000375290 GNPATO15228 680 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 PSMA4P25789 261 aaKnown RBP10.74□□□□□ -0.69
PTCH1-204ENST00000375290 SNX17Q15036 470 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 PLEKHA5Q9HAU0 1116 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 FXR2P51116 673 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTCH1-204ENST00000375290 GPS1Q13098 491 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 PRMT9Q6P2P2 845 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 TEKT4Q8WW24 435 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 SMYD2Q9NRG4 433 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 SNRPAP09012 282 aaKnown RBP10.74□□□□□ -0.69
PTCH1-204ENST00000375290 SIX6OS1Q8N1H7 587 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 SCN3BQ9NY72 215 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 MAFGO15525 162 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 ZNF200P98182 395 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-204ENST00000375290 ARID5BQ14865 1188 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 TADA1Q96BN2 335 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 ETAA1Q9NY74 926 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 SLC13A4Q9UKG4 626 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 GTF3C4Q9UKN8 822 aa10.74□□□□□ -0.69
PTCH1-204ENST00000375290 K7ERI5 159 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 HSD17B3P37058 310 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 ACAP3Q96P50 834 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 FSD1LQ9BXM9 530 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 FBXO40Q9UH90 709 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 AMACRQ9UHK6 382 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 C15orf41Q9Y2V0 281 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 TTLL3Q9Y4R7 772 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 NRXN1Q9ULB1 1477 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 PHKA1P46020 1223 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 R3HDM1Q15032 1099 aaKnown RBP10.73□□□□□ -0.69
PTCH1-204ENST00000375290 JAMLQ86YT9 394 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 DCDC2Q9UHG0 476 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 ZBTB12Q9Y330 459 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-204ENST00000375290 TYK2P29597 1187 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 DRAP1Q14919 205 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-204ENST00000375290 NLRP9Q7RTR0 991 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 DNAJB2P25686 324 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 TRIM16LQ309B1 348 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 XRRA1Q6P2D8 792 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 ZNF710Q8N1W2 664 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 NEU2Q9Y3R4 380 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 UTYO14607 1347 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 F8W031 263 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-204ENST00000375290 M0R3G1 203 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 KPNA4O00629 521 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-204ENST00000375290 WFS1O76024 890 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 UCHL3P15374 230 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 RIPK1Q13546 671 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 KCNV1Q6PIU1 500 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 PRPF18Q99633 342 aaKnown RBP10.73□□□□□ -0.69
PTCH1-204ENST00000375290 LRRC4Q9HBW1 653 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 EFNA5P52803 228 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 GYS2P54840 703 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 NDUFA5Q16718 116 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 GPR141Q7Z602 305 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 LONP2Q86WA8 852 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 CCNYQ8ND76 341 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 TOM1O60784 492 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 PCSK2P16519 638 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 SAMD3Q8N6K7 520 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 BEGAINQ9BUH8 593 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 PRR23AA6NEV1 266 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 EYA4O95677 639 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 GTF2H1P32780 548 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 CHRNA2Q15822 529 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 LRRC24Q50LG9 513 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 CEP170P1Q96L14 293 aa10.73□□□□□ -0.69
PTCH1-204ENST00000375290 SNX2O60749 519 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 CLPTM1O96005 669 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 CCNA1P78396 465 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 DLGAP5Q15398 846 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 ZNF280CQ8ND82 737 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 UHMK1Q8TAS1 419 aaKnown RBP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 DLGAP2Q9P1A6 1054 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 H3BRJ5 948 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 CBFA2T3O75081 653 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 SPRP35270 261 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 CAPN12Q6ZSI9 719 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 GRAMD1CQ8IYS0 662 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 MAP2K7O14733 419 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 CFLARO15519 480 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 MYL6P60660 151 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 PPIL6Q8IXY8 311 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 EDC3Q96F86 508 aaKnown RBP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 NR1H4Q96RI1 486 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 ADGRB2O60241 1585 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 IGF2BP3O00425 579 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTCH1-204ENST00000375290 PEX5P50542 639 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 STX3Q13277 289 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 CCDC80Q76M96 950 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 CEP44Q9C0F1 390 aa10.72□□□□□ -0.69
PTCH1-204ENST00000375290 BHMT2Q9H2M3 363 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms