RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PLEKHG1Q9ULL1 1385 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 CHD1O14646 1710 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 DCDC2CA8MYV0 355 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 TAF4O00268 1085 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 RIPK2O43353 540 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 GPC5P78333 572 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 ZNF200P98182 395 aaPredicted RBP10.83□□□□□ -0.68
CD28-202ENST00000374481 PDIA2Q13087 525 aaKnown RBP10.83□□□□□ -0.68
CD28-202ENST00000374481 NDUFA5Q16718 116 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 TBC1D25Q3MII6 688 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 OR6Y1Q8NGX8 325 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 TPCN2Q8NHX9 752 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 SLC35G2Q8TBE7 412 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 ALKBH8Q96BT7 664 aaKnown RBP10.83□□□□□ -0.68
CD28-202ENST00000374481 DNAJC1Q96KC8 554 aaKnown RBP10.83□□□□□ -0.68
CD28-202ENST00000374481 MTA3Q9BTC8 594 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 C1orf232A0A0U1RR37 186 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 PVALEFA0A1B0GWK0 134 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 GOLGA8SH3BPF8 625 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 GOLGA8MH3BSY2 632 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 HSPA8P11142 646 aaKnown RBP10.83□□□□□ -0.68
CD28-202ENST00000374481 ARL4CP56559 192 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 ITGA7Q13683 1181 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 TTBK2Q6IQ55 1244 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 CYFIP1Q7L576 1253 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 IFNL2Q8IZJ0 200 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 SIX6OS1Q8N1H7 587 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 GCNAQ96QF7 691 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 DENND2DQ9H6A0 471 aaPredicted RBP10.83□□□□□ -0.68
CD28-202ENST00000374481 PTTG2Q9NZH5 202 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 ADA2Q9NZK5 511 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 HPS5Q9UPZ3 1129 aa10.83□□□□□ -0.68
CD28-202ENST00000374481 CFAP65Q6ZU64 1925 aaKnown RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 LOC100653049A0A140TA62 436 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 A0A1B0GVG6 124 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 FOXP2O15409 715 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 KRT34O76011 436 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 PAEPP09466 180 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 MYL7Q01449 175 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 RASA2Q15283 850 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 RGS21Q2M5E4 152 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 SPDYCQ5MJ68 293 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 C6orf183Q5T699 404 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 WDR59Q6PJI9 974 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 NSMFQ6X4W1 530 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 FAM228AQ86W67 206 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 HPS3Q969F9 1004 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 ZFYVE19Q96K21 471 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 KLF6Q99612 283 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 BEGAINQ9BUH8 593 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 PACSIN1Q9BY11 444 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 TRIM9Q9C026 710 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 MAF1Q9H063 256 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 WNT8AQ9H1J5 351 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 PCDH18Q9HCL0 1135 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 TBC1D12O60347 775 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 HOXC9P31274 260 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 ADCY7P51828 1080 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 RPS6KA2Q15349 733 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 SLC45A4Q5BKX6 768 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 TTC33Q6PID6 262 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 SGMS1Q86VZ5 419 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 ARID3BQ8IVW6 561 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 EXOC8Q8IYI6 725 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 DQX1Q8TE96 717 aaKnown RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 JADE3Q92613 823 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 STK33Q9BYT3 514 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 DNAI2Q9GZS0 605 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 CCDC90BQ9GZT6 254 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 BHMT2Q9H2M3 363 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 PSMC3IPQ9P2W1 217 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 DNAJC12Q9UKB3 198 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 LRRC42Q9Y546 428 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 GPC6Q9Y625 555 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 MROH7Q68CQ1 1323 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 LRRC7Q96NW7 1537 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 PALM3A6NDB9 673 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 CLIC2O15247 247 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 ZSCAN9O15535 394 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 MYL2P10916 166 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 PMLP29590 882 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 NSFP46459 744 aaKnown RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 PTK2Q05397 1052 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 ANKRD23Q86SG2 305 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 CDR2LQ86X02 465 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 SPATA5Q8NB90 893 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 FAM89AQ96GI7 184 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 KIAA1024Q9UPX6 916 aa10.82□□□□□ -0.68
CD28-202ENST00000374481 CAB39Q9Y376 341 aaPredicted RBP10.82□□□□□ -0.68
CD28-202ENST00000374481 NPHP3-ACAD11A0A0J9YXS1 232 aa10.81□□□□□ -0.68
CD28-202ENST00000374481 MAFGO15525 162 aa10.81□□□□□ -0.68
CD28-202ENST00000374481 TRIM16O95361 564 aa10.81□□□□□ -0.68
CD28-202ENST00000374481 ADD2P35612 726 aa10.81□□□□□ -0.68
CD28-202ENST00000374481 ATXN3P54252 364 aaPredicted RBP10.81□□□□□ -0.68
CD28-202ENST00000374481 BSPRYQ5W0U4 402 aa10.81□□□□□ -0.68
CD28-202ENST00000374481 ZNF790Q6PG37 636 aa10.81□□□□□ -0.68
CD28-202ENST00000374481 PIGWQ7Z7B1 504 aa10.81□□□□□ -0.68
CD28-202ENST00000374481 PASD1Q8IV76 773 aa10.81□□□□□ -0.68
CD28-202ENST00000374481 ZNF786Q8N393 782 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms