RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 MLXIPQ9HAP2 919 aa8.77□□□□□ -1.01
GARNL3-201ENST00000373386 DMGDHQ9UI17 866 aaKnown RBP8.77□□□□□ -1.01
GARNL3-201ENST00000373386 TRIM17Q9Y577 477 aa8.77□□□□□ -1.01
GARNL3-201ENST00000373386 COL4A3BPQ9Y5P4 624 aa8.77□□□□□ -1.01
GARNL3-201ENST00000373386 CARNS1A5YM72 827 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 PRSS47A8MTI9 375 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 ASAP2O43150 1006 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 PLEKP08567 350 aaPredicted RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 COL6A1P12109 1028 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 CHKAP35790 457 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 EIF4A3P38919 411 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 KCNQ4P56696 695 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 PRKG1Q13976 671 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 EZH2Q15910 746 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 WDR45BQ5MNZ6 344 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 ZNF362Q5T0B9 420 aaPredicted RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 NFRKBQ6P4R8 1299 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 ARHGEF18Q6ZSZ5 1173 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 EIF1ADQ8N9N8 165 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 SCAIQ8N9R8 606 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 SNX29Q8TEQ0 813 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 IFT81Q8WYA0 676 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 NELL1Q92832 810 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 HAS1Q92839 578 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 ARHGEF2Q92974 986 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 CNKSR1Q969H4 720 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 CLMNQ96JQ2 1002 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 MXD3Q9BW11 206 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 CCSER2Q9H7U1 834 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 NYAP2Q9P242 653 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 POLRMTO00411 1230 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 RASA4O43374 803 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 HLA-DOAP06340 250 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 SHMT1P34896 483 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 ACADSBP45954 432 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 MXI1P50539 228 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 B2MP61769 119 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 USP46P62068 366 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 PLEKHG6Q3KR16 790 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 IFT20Q8IY31 132 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 FUKQ8N0W3 1084 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 DQX1Q8TE96 717 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 ANKRD27Q96NW4 1050 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 NOX5Q96PH1 765 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 EVLQ9UI08 416 aaPredicted RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 SERPINA10Q9UK55 444 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 JAG2Q9Y219 1238 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 LOXHD1Q8IVV2 1947 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 GRID2IPA4D2P6 1211 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 GRXCR2A6NFK2 248 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 SPECC1L-ADORA2AF8WAN1 911 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 AP3B1O00203 1094 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 PPEF1O14829 653 aaPredicted RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 B4GALT4O60513 344 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 APOEP02649 317 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 SERPING1P05155 500 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 PRKACBP22694 351 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 MAGEA1P43355 309 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 BPIFB3P59826 476 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 DSTNP60981 165 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 MRPS35P82673 323 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 COASYQ13057 564 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 BYSLQ13895 437 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 TNIP1Q15025 636 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 NFIL3Q16649 462 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 CFAP221Q4G0U5 840 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 NEK5Q6P3R8 708 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 DSTYKQ6XUX3 929 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 EPS8L3Q8TE67 593 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 DHX38Q92620 1227 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 SDCCAG3Q96C92 435 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 VPS50Q96JG6 964 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 OCEL1Q9H607 264 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 NOP53Q9NZM5 478 aaKnown RBP8.76□□□□□ -1.01
GARNL3-201ENST00000373386 AIPL1Q9NZN9 384 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 RIMKLBQ9ULI2 386 aa8.76□□□□□ -1.01
GARNL3-201ENST00000373386 MYH10P35580 1976 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.75□□□□□ -1.01
GARNL3-201ENST00000373386 TNFRSF10AO00220 468 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 FLOT1O75955 427 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 TDP2O95551 362 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 FOSP01100 380 aaPredicted RBP8.75□□□□□ -1.01
GARNL3-201ENST00000373386 GSTT2P0CG29 244 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 GSTT2BP0CG30 244 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 AKR1B1P15121 316 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 DDX5P17844 614 aaKnown RBP8.75□□□□□ -1.01
GARNL3-201ENST00000373386 MUTP22033 750 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 CDC25CP30307 473 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 BMT2Q1RMZ1 405 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 TTMPQ5BVD1 217 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 HGSNATQ68CP4 663 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 ZNF772Q68DY9 489 aaPredicted RBP8.75□□□□□ -1.01
GARNL3-201ENST00000373386 TRIM59Q8IWR1 403 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 TSEN2Q8NCE0 465 aaKnown RBP8.75□□□□□ -1.01
GARNL3-201ENST00000373386 GMCL1P1Q8NEA9 526 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 CDKL2Q92772 493 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 IDI2Q9BXS1 227 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 TPK1Q9H3S4 243 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 MMRN2Q9H8L6 949 aa8.75□□□□□ -1.01
GARNL3-201ENST00000373386 PLCB1Q9NQ66 1216 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms