RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 DMP1Q13316 513 aaPredicted RBP12.88□□□□□ -0.35
NCDN-202ENST00000373243 DYNC1I2Q13409 638 aaKnown RBP12.88□□□□□ -0.35
NCDN-202ENST00000373243 TRPM8Q7Z2W7 1104 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 NLRX1Q86UT6 975 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 ACER1Q8TDN7 264 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 LRRC8CQ8TDW0 803 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 FAM213AQ9BRX8 229 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 CARD9Q9H257 536 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 AJAP1Q9UKB5 411 aaPredicted RBP12.88□□□□□ -0.35
NCDN-202ENST00000373243 TRPC5Q9UL62 973 aaPredicted RBP12.88□□□□□ -0.35
NCDN-202ENST00000373243 USP20Q9Y2K6 914 aa12.88□□□□□ -0.35
NCDN-202ENST00000373243 SGK1O00141 431 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 TRAPPC3O43617 180 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 PHF2O75151 1096 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 CAPN15O75808 1086 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 ARP10275 920 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 PLA2G4FQ68DD2 849 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 MTHFD1LQ6UB35 978 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 LNX1Q8TBB1 728 aaPredicted RBP12.87□□□□□ -0.35
NCDN-202ENST00000373243 DHX38Q92620 1227 aaKnown RBP12.87□□□□□ -0.35
NCDN-202ENST00000373243 ALG3Q92685 438 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 DDX23Q9BUQ8 820 aaKnown RBP12.87□□□□□ -0.35
NCDN-202ENST00000373243 ERVK-5Q9HDB9 667 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.87□□□□□ -0.35
NCDN-202ENST00000373243 STRCQ7RTU9 1775 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 DNAJC8O75937 253 aaPredicted RBP12.87□□□□□ -0.35
NCDN-202ENST00000373243 HSPA6P17066 643 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 CCND1P24385 295 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 NT5C2P49902 561 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 TUBP50607 506 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 RAD23BP54727 409 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 DHX34Q14147 1143 aaKnown RBP12.87□□□□□ -0.35
NCDN-202ENST00000373243 CLUL1Q15846 466 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 ASTE1Q2TB18 679 aaPredicted RBP12.87□□□□□ -0.35
NCDN-202ENST00000373243 CRELD2Q6UXH1 353 aaPredicted RBP12.87□□□□□ -0.35
NCDN-202ENST00000373243 C4orf33Q8N1A6 199 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 VPS52Q8N1B4 723 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 MCUR1Q96AQ8 359 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 SPEF2Q9C093 1822 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 GOLGA8RI6L899 631 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 MAP3K13O43283 966 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 KRT19P08727 400 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 RPL21P46778 160 aaKnown RBP12.87□□□□□ -0.35
NCDN-202ENST00000373243 SERPINB4P48594 390 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 DLG4P78352 724 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 IL9RQ01113 521 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 LARGE2Q8N3Y3 721 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 SPIRE2Q8WWL2 714 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 PWWP2AQ96N64 755 aa12.87□□□□□ -0.35
NCDN-202ENST00000373243 DENND3A2RUS2 1198 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 MMP10P09238 476 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 PYGMP11217 842 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 PIK3CAP42336 1068 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 STRN3Q13033 797 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 DAB2IPQ5VWQ8 1189 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 CERKQ8TCT0 537 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 SCFD2Q8WU76 684 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 ACSF2Q96CM8 615 aaPredicted RBP12.86□□□□□ -0.35
NCDN-202ENST00000373243 OPTNQ96CV9 577 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 ZNF668Q96K58 619 aaPredicted RBP12.86□□□□□ -0.35
NCDN-202ENST00000373243 TMEM206Q9H813 350 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.86□□□□□ -0.35
NCDN-202ENST00000373243 NWD2Q9ULI1 1742 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 H0YIN7 160 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 UBOX5O94941 541 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 KLC1Q07866 573 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 TSNAXIP1Q2TAA8 658 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 ARHGEF16Q5VV41 709 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 ARHGEF18Q6ZSZ5 1173 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 RFX8Q6ZV50 586 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 SLC47A2Q86VL8 602 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 CCDC89Q8N998 374 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
NCDN-202ENST00000373243 PCMTD2Q9NV79 361 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 RAB20Q9NX57 234 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 HSPBP1Q9NZL4 362 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 CTNNAL1Q9UBT7 734 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 TRAF3IP3Q9Y228 551 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 IGSF9BQ9UPX0 1349 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 ZCWPW2Q504Y3 356 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 CC2D2BQ6DHV5 1058 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 CYFIP1Q7L576 1253 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 CBWD2Q8IUF1 395 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.86□□□□□ -0.35
NCDN-202ENST00000373243 SMC6Q96SB8 1091 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 TMEM117Q9H0C3 514 aa12.86□□□□□ -0.35
NCDN-202ENST00000373243 RAVER2Q9HCJ3 691 aaKnown RBP12.86□□□□□ -0.35
NCDN-202ENST00000373243 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
NCDN-202ENST00000373243 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 SLC16A3O15427 465 aaKnown RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 GBP1P32455 592 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 MRPS35P82673 323 aaKnown RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 MTERF2Q49AM1 385 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 BRDTQ58F21 947 aaPredicted RBP12.85□□□□□ -0.35
NCDN-202ENST00000373243 FYB2Q5VWT5 728 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 PPP1R21Q6ZMI0 780 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 RINLQ6ZS11 566 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 KRT27Q7Z3Y8 459 aa12.85□□□□□ -0.35
NCDN-202ENST00000373243 ARHGEF19Q8IW93 802 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms