RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 ART3Q13508 389 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 TPH2Q8IWU9 490 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 GABPB2Q8TAK5 448 aaPredicted RBP12.46□□□□□ -0.41
PTPN1-201ENST00000371621 ASAP3Q8TDY4 903 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 SNF8Q96H20 258 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 SERPINB12Q96P63 405 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 TUBGCP5Q96RT8 1024 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 STK33Q9BYT3 514 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 AGXT2Q9BYV1 514 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 OSBPL8Q9BZF1 889 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 CCDC68Q9H2F9 335 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 GREM2Q9H772 168 aa12.46□□□□□ -0.41
PTPN1-201ENST00000371621 FBXO6Q9NRD1 293 aaPredicted RBP12.46□□□□□ -0.41
PTPN1-201ENST00000371621 PTPRMP28827 1452 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 A0A1W2PQJ5 194 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 E9PMD0 336 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 STRNO43815 780 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 FUT4P22083 530 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 PDE1BQ01064 536 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 OCA2Q04671 838 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 AP1B1Q10567 949 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 TCHHL1Q5QJ38 904 aaPredicted RBP12.46□□□□□ -0.42
PTPN1-201ENST00000371621 EXOC8Q8IYI6 725 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 ACTRT1Q8TDG2 376 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 CENPTQ96BT3 561 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 INPP4AQ96PE3 977 aaPredicted RBP12.46□□□□□ -0.42
PTPN1-201ENST00000371621 POP1Q99575 1024 aaKnown RBP12.46□□□□□ -0.42
PTPN1-201ENST00000371621 STRIP2Q9ULQ0 834 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 C1orf232A0A0U1RR37 186 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 AP3B1O00203 1094 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 SOX11P35716 441 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 STAT4Q14765 748 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 CENPUQ71F23 418 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 IRF2BP1Q8IU81 584 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 RNF148Q8N7C7 305 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 PPM1NQ8N819 430 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 ATP2A3Q93084 1043 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 BTBD6Q96KE9 485 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 SPATA16Q9BXB7 569 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 MAK16Q9BXY0 300 aaKnown RBP12.46□□□□□ -0.42
PTPN1-201ENST00000371621 KLHL11Q9NVR0 708 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 TACC3Q9Y6A5 838 aa12.46□□□□□ -0.42
PTPN1-201ENST00000371621 AIM2O14862 343 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 GUF1Q8N442 669 aaKnown RBP12.45□□□□□ -0.42
PTPN1-201ENST00000371621 CABLES1Q8TDN4 633 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 CKAP2Q8WWK9 683 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 CLPTM1LQ96KA5 538 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 MANSC1Q9H8J5 431 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 ARHGEF3Q9NR81 526 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 EPS15L1Q9UBC2 864 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 FRMPD2Q68DX3 1309 aaPredicted RBP12.45□□□□□ -0.42
PTPN1-201ENST00000371621 ROBO2Q9HCK4 1378 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 TMEM2Q9UHN6 1383 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 DGKIO75912 1065 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 TRIM49P0CI25 452 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 TRIM49CP0CI26 452 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 RASA2Q15283 850 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 MTFR1Q15390 333 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 NTRK3Q16288 839 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 GDPD5Q8WTR4 605 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 CFAP36Q96G28 342 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 DUSP9Q99956 384 aaKnown RBP12.45□□□□□ -0.42
PTPN1-201ENST00000371621 PAGR1Q9BTK6 254 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 METTL14Q9HCE5 456 aaKnown RBP12.45□□□□□ -0.42
PTPN1-201ENST00000371621 GPR108Q9NPR9 543 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 SMYD2Q9NRG4 433 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 GID8Q9NWU2 228 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 RRN3Q9NYV6 651 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 SPATA7Q9P0W8 599 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 MIF4GDA9UHW6 222 aaKnown RBP12.45□□□□□ -0.42
PTPN1-201ENST00000371621 MAGEB3O15480 346 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 HNRNPCL1O60812 293 aaKnown RBP12.45□□□□□ -0.42
PTPN1-201ENST00000371621 KCNA6P17658 529 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 NEK3P51956 506 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 LPCAT4Q643R3 524 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 ZNF571Q7Z3V5 609 aaPredicted RBP12.45□□□□□ -0.42
PTPN1-201ENST00000371621 SYNE4Q8N205 404 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 STKLD1Q8NE28 680 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 AK8Q96MA6 479 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 FAM111AQ96PZ2 611 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 RAB20Q9NX57 234 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 ADA2Q9NZK5 511 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 IL1RAPL1Q9NZN1 696 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 MAGED2Q9UNF1 606 aaPredicted RBP12.45□□□□□ -0.42
PTPN1-201ENST00000371621 SATB2Q9UPW6 733 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 TRIM17Q9Y577 477 aa12.45□□□□□ -0.42
PTPN1-201ENST00000371621 MYMKA6NI61 221 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 H7C1W4 665 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 PEX11AO75192 247 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 BAG3O95817 575 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 HARSP12081 509 aaKnown RBP12.44□□□□□ -0.42
PTPN1-201ENST00000371621 ATF3P18847 181 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 COMTP21964 271 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 PMLP29590 882 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 ZC2HC1CQ53FD0 456 aaPredicted RBP12.44□□□□□ -0.42
PTPN1-201ENST00000371621 ITPRIPL1Q6GPH6 555 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 CATSPER3Q86XQ3 398 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 RHOT2Q8IXI1 618 aa12.44□□□□□ -0.42
PTPN1-201ENST00000371621 RBM12BQ8IXT5 1001 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms