RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 ACTN3Q08043 901 aaPredicted RBP13.77□□□□□ -0.21
GPC3-201ENST00000370818 DRP2Q13474 957 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 PRPF4BQ13523 1007 aaKnown RBP13.77□□□□□ -0.21
GPC3-201ENST00000370818 PTPROQ16827 1216 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 HSDL1Q3SXM5 330 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 FASTKD5Q7L8L6 764 aaKnown RBP13.77□□□□□ -0.21
GPC3-201ENST00000370818 SLC35G2Q8TBE7 412 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 EPS8L1Q8TE68 723 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 AENQ8WTP8 325 aaKnown RBP13.77□□□□□ -0.21
GPC3-201ENST00000370818 RFFLQ8WZ73 363 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 SHC3Q92529 594 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 ARHGEF26Q96DR7 871 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 HINFPQ9BQA5 517 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 SLC24A3Q9HC58 644 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 ACP6Q9NPH0 428 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 RAB20Q9NX57 234 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 STXBP5LQ9Y2K9 1186 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 ZNF233A6NK53 670 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 A6NNZ2 444 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 EXTL3O43909 919 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 SGPL1O95470 568 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 PIGRP01833 764 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 INHBEP58166 350 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 TUBB8Q3ZCM7 444 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 LDLRAD1Q5T700 205 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 C15orf39Q6ZRI6 1047 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 PSPC1Q8WXF1 523 aaKnown RBP13.77□□□□□ -0.21
GPC3-201ENST00000370818 ZNF516Q92618 1163 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 THAP2Q9H0W7 228 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 NRBP2Q9NSY0 501 aa13.77□□□□□ -0.21
GPC3-201ENST00000370818 SEPT11Q9NVA2 429 aaKnown RBP13.77□□□□□ -0.21
GPC3-201ENST00000370818 DDX20Q9UHI6 824 aaKnown RBP13.77□□□□□ -0.21
GPC3-201ENST00000370818 NOCTQ9UK39 431 aaKnown RBP13.77□□□□□ -0.21
GPC3-201ENST00000370818 ANKRD62A6NC57 917 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 CES2O00748 559 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 KCNK3O14649 394 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 CHRNB2P17787 502 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 RFC5P40937 340 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 NLRP11P59045 1033 aaKnown RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 CLDN10P78369 228 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 PDCLQ13371 301 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 BIRC2Q13490 618 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 FAM160B1Q5W0V3 765 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 CRELD2Q6UXH1 353 aaPredicted RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 USP37Q86T82 979 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 NOP9Q86U38 636 aaKnown RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 TRIM50Q86XT4 487 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 DEPTORQ8TB45 409 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 CTNNBL1Q8WYA6 563 aaPredicted RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 ZBTB45Q96K62 511 aaPredicted RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 PCDHB18PQ96TA0 734 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 MMP19Q99542 508 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 GPR20Q99678 358 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 K7ERI5 159 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 CYP26A1O43174 497 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 BUB1BO60566 1050 aaPredicted RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 MAFO75444 373 aaPredicted RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 OSBPP22059 807 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 COPB2P35606 906 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 STRN3Q13033 797 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 CAPSQ13938 189 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 KCTD2Q14681 263 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 EAPPQ56P03 285 aaPredicted RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 CEP85LQ5SZL2 805 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 TMEM63BQ5T3F8 832 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 ARMC9Q7Z3E5 817 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 NT5DC3Q86UY8 548 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 SLC47A2Q86VL8 602 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 FBXO16Q8IX29 292 aaPredicted RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 RPUSD2Q8IZ73 545 aaKnown RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 TATDN2Q93075 761 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 ARL8AQ96BM9 186 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 ISCUQ9H1K1 167 aa13.76□□□□□ -0.21
GPC3-201ENST00000370818 TAF1DQ9H5J8 278 aaPredicted RBP13.76□□□□□ -0.21
GPC3-201ENST00000370818 ACOT2P49753 483 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 MFAP3P55082 362 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 RNASE9P60153 205 aaKnown RBP13.75□□□□□ -0.21
GPC3-201ENST00000370818 IRX1P78414 480 aaPredicted RBP13.75□□□□□ -0.21
GPC3-201ENST00000370818 SLC7A5Q01650 507 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 CCDC62Q6P9F0 684 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 PEX26Q7Z412 305 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 DAAM2Q86T65 1068 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 LMBR1Q8WVP7 490 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 NT5C1BQ96P26 610 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 PI4K2AQ9BTU6 479 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 TARS2Q9BW92 718 aaKnown RBP13.75□□□□□ -0.21
GPC3-201ENST00000370818 TRIM6Q9C030 488 aaPredicted RBP13.75□□□□□ -0.21
GPC3-201ENST00000370818 KIAA1586Q9HCI6 787 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 SUCLA2Q9P2R7 463 aaPredicted RBP13.75□□□□□ -0.21
GPC3-201ENST00000370818 AGO2Q9UKV8 859 aaKnown RBP13.75□□□□□ -0.21
GPC3-201ENST00000370818 COG5Q9UP83 839 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 GLTPD2A6NH11 291 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 ZBTB42B2RXF5 422 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 OPA1O60313 960 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 CYP2C8P10632 490 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 IBSPP21815 317 aaPredicted RBP13.75□□□□□ -0.21
GPC3-201ENST00000370818 ERVK-9P63128 1117 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 PSMD6Q15008 389 aa13.75□□□□□ -0.21
GPC3-201ENST00000370818 TTMPQ5BVD1 217 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms