RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 EPS15L1Q9UBC2 864 aa14.5□□□□□ -0.09
RPF1-201ENST00000370654 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.09
RPF1-201ENST00000370654 I3L4J1 428 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 ZMYND10O75800 440 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 TRAPPC10P48553 1259 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 HMGN5P82970 282 aaKnown RBP14.49□□□□□ -0.09
RPF1-201ENST00000370654 ATF7IP2Q5U623 682 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 GET4Q7L5D6 327 aaPredicted RBP14.49□□□□□ -0.09
RPF1-201ENST00000370654 GPR65Q8IYL9 337 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 SIX5Q8N196 739 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 FAM184AQ8NB25 1140 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 SNX29Q8TEQ0 813 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 HDAC7Q8WUI4 952 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 PIK3R5Q8WYR1 880 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 MFSD1Q9H3U5 465 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 PLEKHA4Q9H4M7 779 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 PIDD1Q9HB75 910 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.49□□□□□ -0.09
RPF1-201ENST00000370654 FBXW11Q9UKB1 542 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 COL4A3Q01955 1670 aa14.49□□□□□ -0.09
RPF1-201ENST00000370654 SFI1A8K8P3 1242 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 ABLIM1O14639 778 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 HIP1RO75146 1068 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 CD2BP2O95400 341 aaKnown RBP14.48□□□□□ -0.09
RPF1-201ENST00000370654 LAMP2P13473 410 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 MUTP22033 750 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 BRCC3P46736 316 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 NPTX2P47972 431 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 CLCN5P51795 746 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 CLCNKBP51801 687 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 PEX3P56589 373 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 OSTNP61366 133 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 GNL2Q13823 731 aaKnown RBP14.48□□□□□ -0.09
RPF1-201ENST00000370654 PDIA5Q14554 519 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 PSMD5Q16401 504 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 HAUS3Q68CZ6 603 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 POTEHQ6S545 545 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 ASCL5Q7RTU5 278 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 GRASPQ7Z6J2 395 aaPredicted RBP14.48□□□□□ -0.09
RPF1-201ENST00000370654 ZMAT2Q96NC0 199 aaKnown RBP14.48□□□□□ -0.09
RPF1-201ENST00000370654 CDT1Q9H211 546 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 PTPRHQ9HD43 1115 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.48□□□□□ -0.09
RPF1-201ENST00000370654 SH2B1Q9NRF2 756 aaPredicted RBP14.48□□□□□ -0.09
RPF1-201ENST00000370654 ZDHHC7Q9NXF8 308 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 IGSF9Q9P2J2 1179 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 NOL7Q9UMY1 257 aaKnown RBP14.48□□□□□ -0.09
RPF1-201ENST00000370654 DMDP11532 3685 aa14.48□□□□□ -0.09
RPF1-201ENST00000370654 CCDC169A6NNP5 214 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 CCL16O15467 120 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 GFRA3O60609 400 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 AOC1P19801 751 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 FGFR3P22607 806 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 TKTP29401 623 aaKnown RBP14.47□□□□□ -0.09
RPF1-201ENST00000370654 PPP2R5AQ15172 486 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 RINT1Q6NUQ1 792 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 CYP26C1Q6V0L0 522 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 C1orf186Q6ZWK4 172 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 KIFAP3Q92845 792 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 ZBTB45Q96K62 511 aaPredicted RBP14.47□□□□□ -0.09
RPF1-201ENST00000370654 IFT74Q96LB3 600 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 PNMA5Q96PV4 448 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 ACO2Q99798 780 aaKnown RBP14.47□□□□□ -0.09
RPF1-201ENST00000370654 ADPGKQ9BRR6 497 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 TARS2Q9BW92 718 aaKnown RBP14.47□□□□□ -0.09
RPF1-201ENST00000370654 HCFC1R1Q9NWW0 138 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 FBXL21Q9UKT6 434 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 CA14Q9ULX7 337 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 TNFSF13BQ9Y275 285 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 NOTCH4Q99466 2003 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 SMIM28A0A1B0GU29 152 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 ANHXE9PGG2 379 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 K7ERI5 159 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 B3GAT3O94766 335 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 C1RP00736 705 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 C8AP07357 584 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 OR1D2P34982 312 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 NUBP1P53384 320 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 RAD51AP2Q09MP3 1159 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 HTR4Q13639 388 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 UPP1Q16831 310 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 DCAF4L1Q3SXM0 396 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 SEZ6Q53EL9 994 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 XKR4Q5GH76 650 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 PARM1Q6UWI2 310 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 ALKAL1Q6UXT8 129 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 ITFG1Q8TB96 612 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 GPR152Q8TDT2 470 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 STAMQ92783 540 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 PLIN2Q99541 437 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 ARHGAP28Q9P2N2 729 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 DPP7Q9UHL4 492 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 NUMBLQ9Y6R0 609 aa14.47□□□□□ -0.09
RPF1-201ENST00000370654 TMEM189-UBE2V1I3L0A0 370 aa14.46□□□□□ -0.1
RPF1-201ENST00000370654 SLC16A4O15374 487 aa14.46□□□□□ -0.1
RPF1-201ENST00000370654 FSHRP23945 695 aa14.46□□□□□ -0.1
RPF1-201ENST00000370654 GRM5P41594 1212 aa14.46□□□□□ -0.1
RPF1-201ENST00000370654 EFNA5P52803 228 aa14.46□□□□□ -0.1
RPF1-201ENST00000370654 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.46□□□□□ -0.1
RPF1-201ENST00000370654 FRMD5Q7Z6J6 570 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms