RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 IRX3P78415 501 aaPredicted RBP4□□□□□ -1.77
MCF2-202ENST00000370573 GHRHRQ02643 423 aa4□□□□□ -1.77
MCF2-202ENST00000370573 GRIN1Q05586 938 aa4□□□□□ -1.77
MCF2-202ENST00000370573 TRAF1Q13077 416 aa4□□□□□ -1.77
MCF2-202ENST00000370573 IL17AQ16552 155 aa4□□□□□ -1.77
MCF2-202ENST00000370573 SNRNP48Q6IEG0 339 aaKnown RBP4□□□□□ -1.77
MCF2-202ENST00000370573 TSHZ1Q6ZSZ6 1077 aa4□□□□□ -1.77
MCF2-202ENST00000370573 LHFPL2Q6ZUX7 228 aa4□□□□□ -1.77
MCF2-202ENST00000370573 ANKRD23Q86SG2 305 aa4□□□□□ -1.77
MCF2-202ENST00000370573 AFAP1L2Q8N4X5 818 aa4□□□□□ -1.77
MCF2-202ENST00000370573 FLCNQ8NFG4 579 aa4□□□□□ -1.77
MCF2-202ENST00000370573 CRYGNQ8WXF5 182 aa4□□□□□ -1.77
MCF2-202ENST00000370573 CLIC6Q96NY7 704 aa4□□□□□ -1.77
MCF2-202ENST00000370573 ANO3Q9BYT9 981 aa4□□□□□ -1.77
MCF2-202ENST00000370573 ASPSCR1Q9BZE9 553 aa4□□□□□ -1.77
MCF2-202ENST00000370573 GLT8D2Q9H1C3 349 aa4□□□□□ -1.77
MCF2-202ENST00000370573 TMEM60Q9H2L4 133 aa4□□□□□ -1.77
MCF2-202ENST00000370573 CAAP1Q9H8G2 361 aa4□□□□□ -1.77
MCF2-202ENST00000370573 GEMIN8Q9NWZ8 242 aaKnown RBP4□□□□□ -1.77
MCF2-202ENST00000370573 PCDHA7Q9UN72 937 aa4□□□□□ -1.77
MCF2-202ENST00000370573 GOLGA6L22H0YM25 854 aa4□□□□□ -1.77
MCF2-202ENST00000370573 IGF2BP3O00425 579 aaKnown RBP eCLIP4□□□□□ -1.77
MCF2-202ENST00000370573 PPFIA4O75335 1185 aa4□□□□□ -1.77
MCF2-202ENST00000370573 EIF3JO75822 258 aaKnown RBP4□□□□□ -1.77
MCF2-202ENST00000370573 ACRP10323 421 aa4□□□□□ -1.77
MCF2-202ENST00000370573 PAX3P23760 479 aa4□□□□□ -1.77
MCF2-202ENST00000370573 MCM7P33993 719 aa4□□□□□ -1.77
MCF2-202ENST00000370573 RAB27AP51159 221 aa4□□□□□ -1.77
MCF2-202ENST00000370573 RING1Q06587 406 aa4□□□□□ -1.77
MCF2-202ENST00000370573 BAATQ14032 418 aaPredicted RBP4□□□□□ -1.77
MCF2-202ENST00000370573 PLS1Q14651 629 aa4□□□□□ -1.77
MCF2-202ENST00000370573 STK38Q15208 465 aa4□□□□□ -1.77
MCF2-202ENST00000370573 ZBTB37Q5TC79 503 aa4□□□□□ -1.77
MCF2-202ENST00000370573 NEK8Q86SG6 692 aa4□□□□□ -1.77
MCF2-202ENST00000370573 RIOX2Q8IUF8 465 aa4□□□□□ -1.77
MCF2-202ENST00000370573 SYNPOQ8N3V7 929 aa4□□□□□ -1.77
MCF2-202ENST00000370573 ZSWIM2Q8NEG5 633 aa4□□□□□ -1.77
MCF2-202ENST00000370573 SYTL5Q8TDW5 730 aaPredicted RBP4□□□□□ -1.77
MCF2-202ENST00000370573 EXOC2Q96KP1 924 aa4□□□□□ -1.77
MCF2-202ENST00000370573 TAAR1Q96RJ0 339 aa4□□□□□ -1.77
MCF2-202ENST00000370573 PAGR1Q9BTK6 254 aa4□□□□□ -1.77
MCF2-202ENST00000370573 TARS2Q9BW92 718 aaKnown RBP4□□□□□ -1.77
MCF2-202ENST00000370573 SPATA9Q9BWV2 254 aa4□□□□□ -1.77
MCF2-202ENST00000370573 MOV10L1Q9BXT6 1211 aaKnown RBP4□□□□□ -1.77
MCF2-202ENST00000370573 TEX13BQ9BXU2 312 aa4□□□□□ -1.77
MCF2-202ENST00000370573 GOLPH3LQ9H4A5 285 aa4□□□□□ -1.77
MCF2-202ENST00000370573 FBRSQ9HAH7 460 aa4□□□□□ -1.77
MCF2-202ENST00000370573 RNF146Q9NTX7 359 aa4□□□□□ -1.77
MCF2-202ENST00000370573 FBXO2Q9UK22 296 aaPredicted RBP4□□□□□ -1.77
MCF2-202ENST00000370573 NOL7Q9UMY1 257 aaKnown RBP4□□□□□ -1.77
MCF2-202ENST00000370573 SLC45A1Q9Y2W3 748 aa4□□□□□ -1.77
MCF2-202ENST00000370573 RABGAP1Q9Y3P9 1069 aa4□□□□□ -1.77
MCF2-202ENST00000370573 CTDP1Q9Y5B0 961 aaPredicted RBP4□□□□□ -1.77
MCF2-202ENST00000370573 MYH7BA7E2Y1 1941 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 A0A0G2JMZ2 1700 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 RPTORQ8N122 1335 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 SLC37A4O43826 429 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 CCNT1O60563 726 aaKnown RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 PPP6R2O75170 966 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 TDP2O95551 362 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 FOSP01100 380 aaPredicted RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 SREBF1P36956 1147 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 ME1P48163 572 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 UBE2HP62256 183 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 ETF1P62495 437 aaKnown RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 RPS6P62753 249 aaKnown RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 UBXN2AP68543 259 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 ATP2C1P98194 919 aaPredicted RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 FSTL1Q12841 308 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 PPP2R5AQ15172 486 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 NKG7Q16617 165 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 LETM2Q2VYF4 491 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 WIPI1Q5MNZ9 446 aaPredicted RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 SYCP2LQ5T4T6 812 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 YOD1Q5VVQ6 348 aaPredicted RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 NSMFQ6X4W1 530 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 SLC30A10Q6XR72 485 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 USP49Q70CQ1 688 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 SPRED2Q7Z698 418 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 MB21D1Q8N884 522 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 CYP2W1Q8TAV3 490 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 KCNG4Q8TDN1 519 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 HEXIM2Q96MH2 286 aaKnown RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 APBA2Q99767 749 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 SPATC1LQ9H0A9 340 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 PNMA2Q9UL42 364 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 ABT1Q9ULW3 272 aaKnown RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 SRPRBQ9Y5M8 271 aaKnown RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 MORC2Q9Y6X9 1032 aaPredicted RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 CYP3A7-CYP3A51PA0A087WV96 503 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 MANSC4A6NHS7 340 aaPredicted RBP3.99□□□□□ -1.77
MCF2-202ENST00000370573 FANCGO15287 622 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 DNAJA2O60884 412 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 CUTAO60888 179 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 EYA4O95677 639 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 CYP3A4P08684 503 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 CYP3A7P24462 503 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 CIITAP33076 1130 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 GUCY2FP51841 1108 aa3.99□□□□□ -1.77
MCF2-202ENST00000370573 SLC10A6Q3KNW5 377 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms