RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 RPF1Q9H9Y2 349 aaKnown RBP16.17■□□□□ 0.18
COL9A1-204ENST00000370496 SPG21Q9NZD8 308 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 PLAGL2Q9UPG8 496 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 STYXL1Q9Y6J8 313 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 ANK1P16157 1881 aa16.17■□□□□ 0.18
COL9A1-204ENST00000370496 NT5C1B-RDH14C9J2C7 533 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 FAM189A1O60320 539 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 KIF20AO95235 890 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 ITGB1P05556 798 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 GARTP22102 1010 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 OR1G1P47890 313 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 SLC11A1P49279 550 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 DSC1Q08554 894 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 SLC39A11Q8N1S5 342 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 GSTCDQ8NEC7 633 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 ERCC4Q92889 916 aaPredicted RBP16.16■□□□□ 0.18
COL9A1-204ENST00000370496 CBWD1Q9BRT8 395 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 ALG13Q9NP73 1137 aaKnown RBP16.16■□□□□ 0.18
COL9A1-204ENST00000370496 MIOSQ9NXC5 875 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 CNTN3Q9P232 1028 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 PRG3Q9Y2Y8 225 aaPredicted RBP16.16■□□□□ 0.18
COL9A1-204ENST00000370496 TRANK1O15050 2925 aa16.16■□□□□ 0.18
COL9A1-204ENST00000370496 CASTOR2A6NHX0 329 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 TULP1O00294 542 aaPredicted RBP16.15■□□□□ 0.18
COL9A1-204ENST00000370496 GRM6O15303 877 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 LPXNO60711 386 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 GALTP07902 379 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 ADSSP30520 456 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 HOXD13P35453 343 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 ACOT2P49753 483 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 KRT17Q04695 432 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 TUSC3Q13454 348 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 ADGRE1Q14246 886 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 ENOX2Q16206 610 aaKnown RBP16.15■□□□□ 0.18
COL9A1-204ENST00000370496 KNOP1Q1ED39 458 aaKnown RBP16.15■□□□□ 0.18
COL9A1-204ENST00000370496 COLGALT2Q8IYK4 626 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 FAM212AQ96EL1 285 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 SAAL1Q96ER3 474 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 LMAN2LQ9H0V9 348 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 CXCL16Q9H2A7 254 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 PCIF1Q9H4Z3 704 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 AGPAT3Q9NRZ7 376 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 SLC38A7Q9NVC3 462 aa16.15■□□□□ 0.18
COL9A1-204ENST00000370496 SMIM28A0A1B0GU29 152 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 LDHAP00338 332 aaKnown RBP16.14■□□□□ 0.17
COL9A1-204ENST00000370496 UBE3AQ05086 875 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 SLC10A6Q3KNW5 377 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 TIGD5Q53EQ6 642 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 POTEHQ6S545 545 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 TMEM173Q86WV6 379 aaPredicted RBP16.14■□□□□ 0.17
COL9A1-204ENST00000370496 ELOA2Q8IYF1 753 aaPredicted RBP16.14■□□□□ 0.17
COL9A1-204ENST00000370496 GOLGA5Q8TBA6 731 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 MRPL38Q96DV4 380 aaKnown RBP16.14■□□□□ 0.17
COL9A1-204ENST00000370496 GSDMAQ96QA5 445 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 PPP1R10Q96QC0 940 aaKnown RBP16.14■□□□□ 0.17
COL9A1-204ENST00000370496 FAM213AQ9BRX8 229 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 PLEKHA5Q9HAU0 1116 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 LMBRD1Q9NUN5 540 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 CPSF3Q9UKF6 684 aaKnown RBP16.14■□□□□ 0.17
COL9A1-204ENST00000370496 FAN1Q9Y2M0 1017 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 PCDHA5Q9Y5H7 936 aa16.14■□□□□ 0.17
COL9A1-204ENST00000370496 NRP1O14786 923 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 KIAA0391O15091 583 aaKnown RBP16.13■□□□□ 0.17
COL9A1-204ENST00000370496 TGFB1I1O43294 461 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 EXTL3O43909 919 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 ALDH2P05091 517 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 KCNE1P15382 129 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 CYP2J2P51589 502 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 SNRPFP62306 86 aaKnown RBP16.13■□□□□ 0.17
COL9A1-204ENST00000370496 HSP90AA2PQ14568 343 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-204ENST00000370496 SMYD4Q8IYR2 804 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-204ENST00000370496 GPD1LQ8N335 351 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 POF1BQ8WVV4 589 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 KIF12Q96FN5 646 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 IGSF21Q96ID5 467 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 ENTPD7Q9NQZ7 604 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 RBAKQ9NYW8 714 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-204ENST00000370496 HSPBP1Q9NZL4 362 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 CGNQ9P2M7 1197 aaKnown RBP16.13■□□□□ 0.17
COL9A1-204ENST00000370496 CACNG4Q9UBN1 327 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 PUF60Q9UHX1 559 aaKnown RBP16.13■□□□□ 0.17
COL9A1-204ENST00000370496 MAPK8IP1Q9UQF2 711 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 STXBP5LQ9Y2K9 1186 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 TTC26A0AVF1 554 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 GOLGA8IPA6NC78 632 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 GOLGA8JA6NMD2 632 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 CLIC2O15247 247 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 MEFVO15553 781 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-204ENST00000370496 CA8P35219 290 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 PLCB3Q01970 1234 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 SPAG1Q07617 926 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 CAMK4Q16566 473 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 XKR4Q5GH76 650 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 ALKAL1Q6UXT8 129 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 CD302Q8IX05 232 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 SPPL3Q8TCT6 385 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 BCL7CQ8WUZ0 217 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-204ENST00000370496 UROC1Q96N76 676 aa16.13■□□□□ 0.17
COL9A1-204ENST00000370496 ZMAT2Q96NC0 199 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms