RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SERPINB4P48594 390 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 TMEM154Q6P9G4 183 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 KDELC2Q7Z4H8 507 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 LUZP2Q86TE4 346 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 OMA1Q96E52 524 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
HCFC1-202ENST00000369984 APRTP07741 180 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 EIF3EP60228 445 aaKnown RBP13.11□□□□□ -0.31
HCFC1-202ENST00000369984 CCDC149Q6ZUS6 474 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 SH3BP5LQ7L8J4 393 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 C16orf62Q7Z3J2 963 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 TRABDQ9H4I3 376 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 BFARQ9NZS9 450 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 ATP9BO43861 1147 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 ENO3P13929 434 aaPredicted RBP13.11□□□□□ -0.31
HCFC1-202ENST00000369984 SERPINB1P30740 379 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 TRIM71Q2Q1W2 868 aaKnown RBP13.11□□□□□ -0.31
HCFC1-202ENST00000369984 NLRP10Q86W26 655 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 ZCCHC17Q9NP64 241 aaKnown RBP13.11□□□□□ -0.31
HCFC1-202ENST00000369984 MPP6Q9NZW5 540 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 PFASO15067 1338 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 ZBTB5O15062 677 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 KRT16P08779 473 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 TUBGCP3Q96CW5 907 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 UTP6Q9NYH9 597 aaKnown RBP13.11□□□□□ -0.31
HCFC1-202ENST00000369984 AMACRQ9UHK6 382 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 PDAP1Q13442 181 aaKnown RBP13.11□□□□□ -0.31
HCFC1-202ENST00000369984 SIK2Q9H0K1 926 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 DEFA1P59665 94 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 DEFA3P59666 94 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 FBXW10Q5XX13 1052 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 HORMAD1Q86X24 394 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 MRPL4Q9BYD3 311 aaKnown RBP13.11□□□□□ -0.31
HCFC1-202ENST00000369984 UBAP1Q9NZ09 502 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 SPHKAPQ2M3C7 1700 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 GUCA1CO95843 209 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 IL6STP40189 918 aaPredicted RBP13.11□□□□□ -0.31
HCFC1-202ENST00000369984 ST13P50502 369 aaKnown RBP13.11□□□□□ -0.31
HCFC1-202ENST00000369984 STAT4Q14765 748 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 PI16Q6UXB8 463 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 GALNT4Q8N4A0 578 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 FAM167AQ96KS9 214 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 THTPAQ9BU02 230 aa13.11□□□□□ -0.31
HCFC1-202ENST00000369984 POTEFA5A3E0 1075 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 PRR29P0C7W0 189 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 POTEIP0CG38 1075 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 SYCP2LQ5T4T6 812 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 POTEGQ6S5H5 508 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 POTEEQ6S8J3 1075 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 FAM162AQ96A26 154 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 C17orf80Q9BSJ5 609 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 OSBPL10Q9BXB5 764 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 PRDM5Q9NQX1 630 aaPredicted RBP13.1□□□□□ -0.31
HCFC1-202ENST00000369984 CHN1P15882 459 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 ADORA2BP29275 332 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 CENPPQ6IPU0 288 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 C4BPBP20851 252 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 RUNX1T1Q06455 604 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
HCFC1-202ENST00000369984 SLC44A4Q53GD3 710 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 IYDQ6PHW0 289 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 POTEAQ6S8J7 498 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 SH3RF3Q8TEJ3 882 aaPredicted RBP13.1□□□□□ -0.31
HCFC1-202ENST00000369984 DCUN1D1Q96GG9 259 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 RNPC3Q96LT9 517 aaKnown RBP13.1□□□□□ -0.31
HCFC1-202ENST00000369984 KIF2CQ99661 725 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 SIKE1Q9BRV8 207 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 XPO7Q9UIA9 1087 aaKnown RBP13.1□□□□□ -0.31
HCFC1-202ENST00000369984 CDYLQ9Y232 598 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 ZNF185O15231 689 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 BBOX1O75936 387 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 BAG6P46379 1132 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 P3H1Q32P28 736 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 DNAL1Q4LDG9 190 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 CLMNQ96JQ2 1002 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 KLHL31Q9H511 634 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 ZNF302Q9NR11 478 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 STK36Q9NRP7 1315 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 POTECB2RU33 542 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 TNIP2Q8NFZ5 429 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 INPP5DQ92835 1189 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 TRIM62Q9BVG3 475 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 DYRK4Q9NR20 520 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 ZNF235Q14590 738 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 SLC30A9Q6PML9 568 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 TMEM179Q6ZVK1 233 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 SYDE1Q6ZW31 735 aaPredicted RBP13.1□□□□□ -0.31
HCFC1-202ENST00000369984 GINS4Q9BRT9 223 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 FOXP2O15409 715 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 CYTH3O43739 400 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 RTN2O75298 545 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 SERPIND1P05546 499 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 MDH1P40925 334 aaKnown RBP13.1□□□□□ -0.31
HCFC1-202ENST00000369984 PPP3CCP48454 512 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 TSC22D1Q15714 1073 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 SPATA4Q8NEY3 305 aa13.1□□□□□ -0.31
HCFC1-202ENST00000369984 CMTM5Q96DZ9 223 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms