RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 EVI5O60447 810 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 CALCAP01258 141 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 ETF1P62495 437 aaKnown RBP15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 KLHL30Q0D2K2 578 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 ZACNQ401N2 412 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 EFCAB13Q8IY85 973 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 CGRRF1Q99675 332 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 KIAA1586Q9HCI6 787 aa15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 PRMT7Q9NVM4 692 aaPredicted RBP15.26■□□□□ 0.03
HMGCS2-201ENST00000369406 GRIN2DO15399 1336 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 UMODL1Q5DID0 1318 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 CXCL8P10145 99 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 TNNI1P19237 187 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 CYLC1P35663 651 aaPredicted RBP15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 SOX5P35711 763 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 MAP2K2P36507 400 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 SLC9C1Q4G0N8 1177 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 MAP3K21Q5TCX8 1036 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 CCSAPQ6IQ19 270 aaPredicted RBP15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 REM2Q8IYK8 340 aaPredicted RBP15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 FBXL13Q8NEE6 735 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 SCLT1Q96NL6 688 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 SYT11Q9BT88 431 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 PACSIN1Q9BY11 444 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 RAB20Q9NX57 234 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 DNAI1Q9UI46 699 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 SMIM35A0A1B0GVV1 85 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 SSU72P8A0A1W2PR75 194 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 KIAA0391O15091 583 aaKnown RBP15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 CCP110O43303 1012 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 HLA-DRAP01903 254 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 MYCNP04198 464 aaPredicted RBP15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 GTF2H1P32780 548 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 PRKCIP41743 596 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 KIF22Q14807 665 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 NBPF20Q3BBV1 942 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 PALB2Q86YC2 1186 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 ZNF296Q8WUU4 475 aaPredicted RBP15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 FAM212AQ96EL1 285 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 NUCKS1Q9H1E3 243 aaKnown RBP15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 APOBEC3GQ9HC16 384 aaKnown RBP15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 XPNPEP3Q9NQH7 507 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 SALL4Q9UJQ4 1053 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 NENFQ9UMX5 172 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 PCDHA13Q9Y5I0 950 aa15.25■□□□□ 0.03
HMGCS2-201ENST00000369406 AKR1B10O60218 316 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 RARBP10826 455 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 GNG11P61952 73 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 GDF6Q6KF10 455 aaPredicted RBP15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 LNX1Q8TBB1 728 aaPredicted RBP15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 SLC20A1Q8WUM9 679 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 OSBPL7Q9BZF2 842 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 MTMR12Q9C0I1 747 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 ADAMTS1Q9UHI8 967 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 MYO6Q9UM54 1294 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 C17orf102A2RUQ5 167 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 ZEB2O60315 1214 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 LDHAP00338 332 aaKnown RBP15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 NKX3-2P78367 333 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 ENPEPQ07075 957 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 TMEM132AQ24JP5 1023 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 PPM1KQ8N3J5 372 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 KLHDC9Q8NEP7 349 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 FNBP1Q96RU3 617 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 DEF6Q9H4E7 631 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 PAXBP1Q9Y5B6 917 aa15.24■□□□□ 0.03
HMGCS2-201ENST00000369406 SCN1AP35498 2009 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 DDX3XO00571 662 aaKnown RBP eCLIP15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 RIOK3O14730 519 aaKnown RBP15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 CST3P01034 146 aaPredicted RBP15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 STAT1P42224 750 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 KCNA10Q16322 511 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 ZNF410Q86VK4 478 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 C7orf31Q8N865 590 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 JAKMIP2Q96AA8 810 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 MTG1Q9BT17 334 aaPredicted RBP15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 GUCA1BQ9UMX6 200 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 MKI67P46013 3256 aaKnown RBP15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 HMGCRP04035 888 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 ASGR1P07306 291 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 STAG3L1P0CL83 205 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 VAV2P52735 878 aa15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 HSP90AA2PQ14568 343 aaPredicted RBP15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 EIF2AQ9BY44 585 aaKnown RBP15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 IFIH1Q9BYX4 1025 aaKnown RBP15.23■□□□□ 0.03
HMGCS2-201ENST00000369406 A0A1B0GUA9 196 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 NFICP08651 508 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 DARSP14868 501 aaKnown RBP15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 BIRC3Q13489 604 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 SLC18A3Q16572 532 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 KIAA1328Q86T90 577 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 SLC35F6Q8N357 371 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 LRRN4CLQ8ND94 238 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 KATNAL1Q9BW62 490 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 GTF2IRD1Q9UHL9 959 aa15.22■□□□□ 0.03
HMGCS2-201ENST00000369406 GOLGA6L9A6NEM1 432 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms