RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 PTK7Q13308 1070 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 DCAF4L1Q3SXM0 396 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 ZACNQ401N2 412 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 LMBRD2Q68DH5 695 aaPredicted RBP25.85■■□□□ 1.73
SNX3-203ENST00000368979 GJB7Q6PEY0 223 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 WDR49Q8IV35 697 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 FBXL13Q8NEE6 735 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 TAS1R2Q8TE23 839 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 SEMA4DQ92854 862 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 CHP1Q99653 195 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 ANK1P16157 1881 aa25.85■■□□□ 1.73
SNX3-203ENST00000368979 TULP1O00294 542 aaPredicted RBP25.84■■□□□ 1.73
SNX3-203ENST00000368979 LRRN2O75325 713 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 CLTAP09496 248 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 STAG3L1P0CL83 205 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 OSTNP61366 133 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 MTF1Q14872 753 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 MTFR1Q15390 333 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 NOTUMQ6P988 496 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 TMEM192Q8IY95 271 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 FAM84AQ96KN4 292 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 SENP6Q9GZR1 1112 aaPredicted RBP25.84■■□□□ 1.73
SNX3-203ENST00000368979 RAB20Q9NX57 234 aa25.84■■□□□ 1.73
SNX3-203ENST00000368979 KBTBD13C9JR72 458 aa25.83■■□□□ 1.73
SNX3-203ENST00000368979 AP3M2P53677 418 aa25.83■■□□□ 1.73
SNX3-203ENST00000368979 TDRD10Q5VZ19 366 aaKnown RBP25.83■■□□□ 1.73
SNX3-203ENST00000368979 PHLDB3Q6NSJ2 640 aa25.83■■□□□ 1.73
SNX3-203ENST00000368979 SLC27A1Q6PCB7 646 aa25.83■■□□□ 1.73
SNX3-203ENST00000368979 APBB1IPQ7Z5R6 666 aaPredicted RBP25.83■■□□□ 1.73
SNX3-203ENST00000368979 RPF1Q9H9Y2 349 aaKnown RBP25.83■■□□□ 1.73
SNX3-203ENST00000368979 STARD7Q9NQZ5 370 aa25.83■■□□□ 1.73
SNX3-203ENST00000368979 A0A0U1RQG5 324 aaPredicted RBP25.83■■□□□ 1.72
SNX3-203ENST00000368979 DNM1LO00429 736 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 B4GALT4O60513 344 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 IL18RAPO95256 599 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 CXCL8P10145 99 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 GRM5P41594 1212 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 SFMBT2Q5VUG0 894 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 FAM228AQ86W67 206 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 OR5B17Q8NGF7 314 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 DHX38Q92620 1227 aaKnown RBP25.83■■□□□ 1.72
SNX3-203ENST00000368979 SPAG5Q96R06 1193 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 RRAGDQ9NQL2 400 aaPredicted RBP25.83■■□□□ 1.72
SNX3-203ENST00000368979 TRMT13Q9NUP7 481 aaKnown RBP25.83■■□□□ 1.72
SNX3-203ENST00000368979 SPTLC3Q9NUV7 552 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 AIPL1Q9NZN9 384 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 DNAJC12Q9UKB3 198 aa25.83■■□□□ 1.72
SNX3-203ENST00000368979 MEFVO15553 781 aaPredicted RBP25.82■■□□□ 1.72
SNX3-203ENST00000368979 CHRNA1P02708 482 aa25.82■■□□□ 1.72
SNX3-203ENST00000368979 CCL5P13501 91 aa25.82■■□□□ 1.72
SNX3-203ENST00000368979 RAPGEF1Q13905 1077 aa25.82■■□□□ 1.72
SNX3-203ENST00000368979 TRIM71Q2Q1W2 868 aaKnown RBP25.82■■□□□ 1.72
SNX3-203ENST00000368979 TOGARAM2Q6ZUX3 1019 aa25.82■■□□□ 1.72
SNX3-203ENST00000368979 ARHGEF19Q8IW93 802 aa25.82■■□□□ 1.72
SNX3-203ENST00000368979 CCAR2Q8N163 923 aaKnown RBP25.82■■□□□ 1.72
SNX3-203ENST00000368979 NOC2LQ9Y3T9 749 aaKnown RBP25.82■■□□□ 1.72
SNX3-203ENST00000368979 CENPFP49454 3210 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 NPTXRO95502 500 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 CTSHP09668 335 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 HGSNATQ68CP4 663 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 EFCAB13Q8IY85 973 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 FAM212AQ96EL1 285 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 DEFB118Q96PH6 123 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 STK33Q9BYT3 514 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 ARHGAP20Q9P2F6 1191 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 OGDHLQ9ULD0 1010 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 PIN4Q9Y237 131 aaKnown RBP25.81■■□□□ 1.72
SNX3-203ENST00000368979 MROH7Q68CQ1 1323 aa25.81■■□□□ 1.72
SNX3-203ENST00000368979 ZC3H11AO75152 810 aaKnown RBP eCLIP25.8■■□□□ 1.72
SNX3-203ENST00000368979 VNN1O95497 513 aa25.8■■□□□ 1.72
SNX3-203ENST00000368979 THPOP40225 353 aa25.8■■□□□ 1.72
SNX3-203ENST00000368979 EIF2AQ9BY44 585 aaKnown RBP25.8■■□□□ 1.72
SNX3-203ENST00000368979 GPR88Q9GZN0 384 aa25.8■■□□□ 1.72
SNX3-203ENST00000368979 NOD1Q9Y239 953 aa25.8■■□□□ 1.72
SNX3-203ENST00000368979 RALGAPA2Q2PPJ7 1873 aa25.8■■□□□ 1.72
SNX3-203ENST00000368979 USP27XA6NNY8 438 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 F8VZ95 297 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 HLA-DRAP01903 254 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 HSPA8P11142 646 aaKnown RBP25.79■■□□□ 1.72
SNX3-203ENST00000368979 BIRC3Q13489 604 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 SLC10A6Q3KNW5 377 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 FAM26DQ5JW98 314 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 NT5C1BQ96P26 610 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 ACAP3Q96P50 834 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 RNF208Q9H0X6 261 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 ASB7Q9H672 318 aa25.79■■□□□ 1.72
SNX3-203ENST00000368979 NHEJ1Q9H9Q4 299 aaPredicted RBP25.79■■□□□ 1.72
SNX3-203ENST00000368979 LACTBL1A8MY62 500 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 ARVCFO00192 962 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 CAND2O75155 1236 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 MYCP01106 439 aaPredicted RBP25.78■■□□□ 1.72
SNX3-203ENST00000368979 PIK3CAP42336 1068 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 DRAP1Q14919 205 aaPredicted RBP25.78■■□□□ 1.72
SNX3-203ENST00000368979 ASIC2Q16515 512 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 UBXN11Q5T124 520 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 CTU1Q7Z7A3 348 aaKnown RBP25.78■■□□□ 1.72
SNX3-203ENST00000368979 CCDC170Q8IYT3 715 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 HELQQ8TDG4 1101 aa25.78■■□□□ 1.72
SNX3-203ENST00000368979 CCDC94Q9BW85 323 aaPredicted RBP25.78■■□□□ 1.72
SNX3-203ENST00000368979 SEZ6LQ9BYH1 1024 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms