RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 KDM4CQ9H3R0 1056 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 GRIN3BO60391 1043 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 CELF2O95319 508 aaKnown RBP18.94■□□□□ 0.62
SNX27-203ENST00000368843 ITGA4P13612 1032 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 EIF3EP60228 445 aaKnown RBP18.94■□□□□ 0.62
SNX27-203ENST00000368843 STRIP1Q5VSL9 837 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 TRIML2Q8N7C3 387 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 BFARQ9NZS9 450 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 QRICH2Q9H0J4 1663 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 SPDYE5A6NIY4 337 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 SPDYE7PQ495Y7 208 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 ZNF512Q96ME7 567 aaPredicted RBP18.94■□□□□ 0.62
SNX27-203ENST00000368843 TMEM60Q9H2L4 133 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 WDR19Q8NEZ3 1342 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 TLR2O60603 784 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 STX18Q9P2W9 335 aaKnown RBP18.94■□□□□ 0.62
SNX27-203ENST00000368843 CEP55Q53EZ4 464 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 NAF1Q96HR8 494 aaKnown RBP18.94■□□□□ 0.62
SNX27-203ENST00000368843 ABHD8Q96I13 439 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 BTBD6Q96KE9 485 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 LRRC37BQ96QE4 947 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 KIFC3Q9BVG8 833 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 CHCHD3Q9NX63 227 aaKnown RBP18.94■□□□□ 0.62
SNX27-203ENST00000368843 DCTN4Q9UJW0 460 aa18.94■□□□□ 0.62
SNX27-203ENST00000368843 PSMD14O00487 310 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 EYA4O95677 639 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 EML4Q9HC35 981 aaKnown RBP18.93■□□□□ 0.62
SNX27-203ENST00000368843 ZNF70Q9UC06 446 aaPredicted RBP18.93■□□□□ 0.62
SNX27-203ENST00000368843 SNX17Q15036 470 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 MTBPQ96DY7 904 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 CCDC90BQ9GZT6 254 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 FLT1P17948 1338 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 ABCC3O15438 1527 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 FLOT2Q14254 428 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 TBC1D19Q8N5T2 526 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 ZNF197O14709 1029 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 ARSEP51690 589 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 BEND6Q5SZJ8 279 aaPredicted RBP18.93■□□□□ 0.62
SNX27-203ENST00000368843 CLMNQ96JQ2 1002 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 ISCA1Q9BUE6 129 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 hCG_2014768A0A024R1R8 64 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 CCL15-CCL14A0A0B4J2E2 113 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 WASHC5Q12768 1159 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 CCL15Q16663 113 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 RRM2BQ7LG56 351 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 TEX13BQ9BXU2 312 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 HSPBP1Q9NZL4 362 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 CPSF1Q10570 1443 aaKnown RBP18.93■□□□□ 0.62
SNX27-203ENST00000368843 STKLD1Q8NE28 680 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 ZFYVE19Q96K21 471 aa18.93■□□□□ 0.62
SNX27-203ENST00000368843 GPBP1L1Q9HC44 474 aaPredicted RBP18.93■□□□□ 0.62
SNX27-203ENST00000368843 C19orf81C9J6K1 198 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 CCDC137Q6PK04 289 aaKnown RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 ANKMY2Q8IV38 441 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 CPA5Q8WXQ8 436 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 PCDHGB4Q9UN71 923 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.92■□□□□ 0.62
SNX27-203ENST00000368843 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 E2F8A0AVK6 867 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 RBP5P82980 135 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 CDC42EP1Q00587 391 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 PDAP1Q13442 181 aaKnown RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 SRBD1Q8N5C6 995 aaKnown RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 ATPAF2Q8N5M1 289 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 GLI2P10070 1586 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 C2CD2LO14523 706 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 PPP3CCP48454 512 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 CLCN6P51797 869 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 SPDYAQ5MJ70 313 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 CDV3Q9UKY7 258 aaKnown RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 CROCC2H7BZ55 1655 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 GTPBP10A4D1E9 387 aaKnown RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 SKIP12755 728 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 TYK2P29597 1187 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 MKRN4PQ13434 485 aaPredicted RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 SDE2Q6IQ49 451 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 ARL8AQ96BM9 186 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 OSBPL9Q96SU4 736 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 AGPAT1Q99943 283 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 ALG13Q9NP73 1137 aaKnown RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 ARIH2O95376 493 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 LMNAP02545 664 aaKnown RBP18.92■□□□□ 0.62
SNX27-203ENST00000368843 PCSK7Q16549 785 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 C1orf146Q5VVC0 180 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 DAGLAQ9Y4D2 1042 aa18.92■□□□□ 0.62
SNX27-203ENST00000368843 AP1ARQ63HQ0 302 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 EMBQ6PCB8 327 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 NEDD1Q8NHV4 660 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 CCDC78A2IDD5 438 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 ORC4O43929 436 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 UBE3AQ05086 875 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 COBLL1Q53SF7 1204 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 PKN3Q6P5Z2 889 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 CATSPER3Q86XQ3 398 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 SLC30A5Q8TAD4 765 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 GFAPP14136 432 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 SREBF2Q12772 1141 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 LRRC14Q15048 493 aa18.91■□□□□ 0.62
SNX27-203ENST00000368843 C12orf60Q5U649 245 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms