RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 L1TD1Q5T7N2 865 aaKnown RBP24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 PDE12Q6L8Q7 609 aaKnown RBP24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 UNC13DQ70J99 1090 aa24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 CEP57L1Q8IYX8 460 aa24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 FSIP1Q8NA03 581 aa24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 MICAL1Q8TDZ2 1067 aa24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 RABGGTAQ92696 567 aa24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 PAGE5Q96GU1 130 aa24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 ZMAT2Q96NC0 199 aaKnown RBP24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 THEGQ9P2T0 379 aa24.52■■□□□ 1.52
ECHDC1-203ENST00000368291 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 SMIM28A0A1B0GU29 152 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 TNFSF9P41273 254 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 MATR3P43243 847 aaKnown RBP eCLIP24.51■■□□□ 1.518e-7■■■■■ 31.9
ECHDC1-203ENST00000368291 YARSP54577 528 aaKnown RBP24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 SLC10A6Q3KNW5 377 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 ZBTB41Q5SVQ8 909 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 PLPP4Q5VZY2 271 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 VPS52Q8N1B4 723 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 ZBP1Q9H171 429 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 TOPORSQ9NS56 1045 aaPredicted RBP24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 CNTN3Q9P232 1028 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 USP25Q9UHP3 1055 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 PCDHB13Q9Y5F0 798 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 VWA8A3KMH1 1905 aa24.51■■□□□ 1.51
ECHDC1-203ENST00000368291 OGTO15294 1046 aa24.5■■□□□ 1.51
ECHDC1-203ENST00000368291 ADSSP30520 456 aa24.5■■□□□ 1.51
ECHDC1-203ENST00000368291 TFF2Q03403 129 aa24.5■■□□□ 1.51
ECHDC1-203ENST00000368291 ALCAMQ13740 583 aa24.5■■□□□ 1.51
ECHDC1-203ENST00000368291 TMC7Q7Z402 723 aa24.5■■□□□ 1.51
ECHDC1-203ENST00000368291 RNF168Q8IYW5 571 aaPredicted RBP24.5■■□□□ 1.51
ECHDC1-203ENST00000368291 HLA-CQ95604 372 aa24.5■■□□□ 1.51
ECHDC1-203ENST00000368291 ENTPD7Q9NQZ7 604 aa24.5■■□□□ 1.51
ECHDC1-203ENST00000368291 COG5Q9UP83 839 aa24.5■■□□□ 1.51
ECHDC1-203ENST00000368291 CASTOR2A6NHX0 329 aa24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 HIDE1A8MVS5 230 aa24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 KLRC4O43908 158 aa24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 PRPF6O94906 941 aaKnown RBP24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 CLTAP09496 248 aa24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 KCNE1P15382 129 aa24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 SOX4Q06945 474 aaPredicted RBP24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 CTC1Q2NKJ3 1217 aa24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 RBM23Q86U06 439 aaKnown RBP24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 PABPC5Q96DU9 382 aaKnown RBP24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 ACCSQ96QU6 501 aa24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 UBE2ZQ9H832 354 aaPredicted RBP24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 NGRNQ9NPE2 291 aaKnown RBP24.49■■□□□ 1.51
ECHDC1-203ENST00000368291 TCF20Q9UGU0 1960 aaKnown RBP24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 PVALEFA0A1B0GWK0 134 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 TTC26A0AVF1 554 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 PER2O15055 1255 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 LINC01565O15544 149 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 CXCL8P10145 99 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 CTSAP10619 480 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 HOXD13P35453 343 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 LTBRP36941 435 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 NRIP1P48552 1158 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 EPM2AIP1Q7L775 607 aaPredicted RBP24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 TAS1R1Q7RTX1 841 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 MRPL43Q8N983 215 aaKnown RBP24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 AUTS2Q8WXX7 1259 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 COLEC11Q9BWP8 271 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 IGFLR1Q9H665 355 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 GOLGA2P5Q9HBQ8 144 aa24.48■■□□□ 1.51
ECHDC1-203ENST00000368291 C2orf71A6NGG8 1288 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 NR1I2O75469 434 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 ZNF202O95125 648 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 ADRB2P07550 413 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 IGFBP6P24592 240 aaPredicted RBP24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 HSP90AA2PQ14568 343 aaPredicted RBP24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 SMC1AQ14683 1233 aaKnown RBP24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 FAM26FQ5R3K3 315 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 SLFN12LQ6IEE8 588 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 ATXN2LQ8WWM7 1075 aaKnown RBP24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 MSTO1Q9BUK6 570 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 CHMP5Q9NZZ3 219 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 CPSF3Q9UKF6 684 aaKnown RBP24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 EXOC7Q9UPT5 735 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 IRAK3Q9Y616 596 aa24.47■■□□□ 1.51
ECHDC1-203ENST00000368291 PRR29P0C7W0 189 aa24.46■■□□□ 1.51
ECHDC1-203ENST00000368291 ADAM15Q13444 863 aa24.46■■□□□ 1.51
ECHDC1-203ENST00000368291 ENOX2Q16206 610 aaKnown RBP24.46■■□□□ 1.51
ECHDC1-203ENST00000368291 DUSP6Q16828 381 aa24.46■■□□□ 1.51
ECHDC1-203ENST00000368291 KRBA2Q6ZNG9 492 aa24.46■■□□□ 1.51
ECHDC1-203ENST00000368291 PPP2R3CQ969Q6 453 aa24.46■■□□□ 1.51
ECHDC1-203ENST00000368291 GPR62Q9BZJ7 368 aa24.46■■□□□ 1.51
ECHDC1-203ENST00000368291 TLE6Q9H808 572 aa24.46■■□□□ 1.51
ECHDC1-203ENST00000368291 ADAM28Q9UKQ2 775 aa24.46■■□□□ 1.51
ECHDC1-203ENST00000368291 EIF3DO15371 548 aaKnown RBP eCLIP24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 KIF4AO95239 1232 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 CXCL14O95715 111 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 GLP2RO95838 553 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 SOD2P04179 222 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 DLX2Q07687 328 aaPredicted RBP24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 KYAT1Q16773 422 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 FUT10Q6P4F1 479 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 CD300LGQ6UXG3 332 aa24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 CRELD2Q6UXH1 353 aaPredicted RBP24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 FMR1NBQ8N0W7 255 aaPredicted RBP24.45■■□□□ 1.5
ECHDC1-203ENST00000368291 EFHBQ8N7U6 833 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms