RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PUS10Q3MIT2 529 aaKnown RBP10.79□□□□□ -0.68
CD48-202ENST00000368046 ZNF568Q3ZCX4 644 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 PLPP4Q5VZY2 271 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 ALKAL1Q6UXT8 129 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 ZBTB33Q86T24 672 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.79□□□□□ -0.68
CD48-202ENST00000368046 BCL7CQ8WUZ0 217 aaPredicted RBP10.79□□□□□ -0.68
CD48-202ENST00000368046 ACAP3Q96P50 834 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 FIZ1Q96SL8 496 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 COL25A1Q9BXS0 654 aaPredicted RBP10.79□□□□□ -0.68
CD48-202ENST00000368046 TOPORSQ9NS56 1045 aaPredicted RBP10.79□□□□□ -0.68
CD48-202ENST00000368046 FAM13BQ9NYF5 915 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 SEL1LQ9UBV2 794 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 PCDHGC5Q9Y5F6 944 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 UNC80Q8N2C7 3258 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 XIRP2A4UGR9 3374 aa10.79□□□□□ -0.68
CD48-202ENST00000368046 A0A0C4DFX4 3053 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 PRUNE2Q8WUY3 3088 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 SMIM28A0A1B0GU29 152 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 C2orf71A6NGG8 1288 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 H3BQ06 376 aaPredicted RBP10.78□□□□□ -0.68
CD48-202ENST00000368046 PTGESO14684 152 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 LINC01565O15544 149 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 TADA2AO75478 443 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 EFEMP2O95967 443 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 PIGRP01833 764 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 NMT1P30419 496 aaKnown RBP10.78□□□□□ -0.68
CD48-202ENST00000368046 KCNQ1P51787 676 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 OSTNP61366 133 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 KRT85P78386 507 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 DLX2Q07687 328 aaPredicted RBP10.78□□□□□ -0.68
CD48-202ENST00000368046 NAB2Q15742 525 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 DUSP6Q16828 381 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 ZC2HC1CQ53FD0 456 aaPredicted RBP10.78□□□□□ -0.68
CD48-202ENST00000368046 XKR4Q5GH76 650 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 HERC4Q5GLZ8 1057 aaPredicted RBP10.78□□□□□ -0.68
CD48-202ENST00000368046 RESP18Q5W5W9 173 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 ADALQ6DHV7 355 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 TMEM184AQ6ZMB5 413 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 CEP120Q8N960 986 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 LEO1Q8WVC0 666 aaPredicted RBP10.78□□□□□ -0.68
CD48-202ENST00000368046 BICD1Q96G01 975 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 ZBP1Q9H171 429 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 TNMDQ9H2S6 317 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 KBTBD4Q9NVX7 518 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 SSX2IPQ9Y2D8 614 aa10.78□□□□□ -0.68
CD48-202ENST00000368046 PRG3Q9Y2Y8 225 aaPredicted RBP10.78□□□□□ -0.68
CD48-202ENST00000368046 GRXCR2A6NFK2 248 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 K7ENM7 598 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 POLR2DO15514 142 aaKnown RBP10.77□□□□□ -0.69
CD48-202ENST00000368046 LILRB3O75022 631 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 SOD2P04179 222 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 IDEP14735 1019 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 MATR3P43243 847 aaKnown RBP eCLIP10.77□□□□□ -0.69
CD48-202ENST00000368046 LIG4P49917 911 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 NUCB2P80303 420 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 KCNC3Q14003 757 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 KYAT1Q16773 422 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 TAS1R1Q7RTX1 841 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 MAP4K3Q8IVH8 894 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 CCDC65Q8IXS2 484 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 GPR65Q8IYL9 337 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 STAMQ92783 540 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 DHX58Q96C10 678 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 MSLNLQ96KJ4 702 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 SPATA32Q96LK8 384 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 PPP1R10Q96QC0 940 aaKnown RBP10.77□□□□□ -0.69
CD48-202ENST00000368046 PYM1Q9BRP8 204 aaKnown RBP10.77□□□□□ -0.69
CD48-202ENST00000368046 STRA6Q9BX79 667 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 VN1R3Q9BXE9 311 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 IRX2Q9BZI1 471 aaPredicted RBP10.77□□□□□ -0.69
CD48-202ENST00000368046 HAPLN2Q9GZV7 340 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 SCAND2PQ9GZW5 306 aaPredicted RBP10.77□□□□□ -0.69
CD48-202ENST00000368046 CXCL16Q9H2A7 254 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 MRPL44Q9H9J2 332 aaKnown RBP10.77□□□□□ -0.69
CD48-202ENST00000368046 PLEKHA5Q9HAU0 1116 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 OLFML3Q9NRN5 406 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 MRPL17Q9NRX2 175 aaKnown RBP10.77□□□□□ -0.69
CD48-202ENST00000368046 CHST7Q9NS84 486 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 PANK4Q9NVE7 773 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 MARCH5Q9NX47 278 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 CLEC1BQ9P126 229 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 ADAM28Q9UKQ2 775 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 FAM50BQ9Y247 325 aa10.77□□□□□ -0.69
CD48-202ENST00000368046 SPTBN5Q9NRC6 3674 aaKnown RBP10.77□□□□□ -0.69
CD48-202ENST00000368046 NLRC5Q86WI3 1866 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 COL4A4P53420 1690 aaPredicted RBP10.76□□□□□ -0.69
CD48-202ENST00000368046 REV3LO60673 3130 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 FRMD3A2A2Y4 597 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 ARHGAP33O14559 1287 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 HNRNPDLO14979 420 aaKnown RBP10.76□□□□□ -0.69
CD48-202ENST00000368046 CLASP2O75122 1294 aaKnown RBP10.76□□□□□ -0.69
CD48-202ENST00000368046 CLTAP09496 248 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 KCNE1P15382 129 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 CMA1P23946 247 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 CA8P35219 290 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 NDUFV1P49821 464 aa10.76□□□□□ -0.69
CD48-202ENST00000368046 HSP90AA2PQ14568 343 aaPredicted RBP10.76□□□□□ -0.69
CD48-202ENST00000368046 NOLC1Q14978 699 aaKnown RBP eCLIP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms