RNA–Protein interactions for RNA: ENST00000367041.5

CD46-207, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,281 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-207ENST00000367041 OTOAQ7RTW8 1153 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 USP17L1Q7RTZ2 530 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 ANKRD23Q86SG2 305 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 PSPC1Q8WXF1 523 aaKnown RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 EPB41L1Q9H4G0 881 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 ZNF330Q9Y3S2 320 aaPredicted RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 SNED1Q8TER0 1413 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 hCG_1984214I3L0E3 225 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 TYROBPO43914 113 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 STARD3NLO95772 234 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 ASLP04424 464 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CASP4P49662 377 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 RAP1GDS1P52306 607 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CAV1Q03135 178 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CALCOCO2Q13137 446 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 STAT4Q14765 748 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CHRNA2Q15822 529 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 NFIL3Q16649 462 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 HERC4Q5GLZ8 1057 aaPredicted RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 FAM91A1Q658Y4 838 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 SYDE1Q6ZW31 735 aaPredicted RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 NLRP9Q7RTR0 991 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CCDC25Q86WR0 208 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CCDC105Q8IYK2 499 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 LARGE2Q8N3Y3 721 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 ZNF713Q8N859 430 aaPredicted RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 IRGQQ8WZA9 623 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 SNF8Q96H20 258 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 SLC4A9Q96Q91 983 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CPVLQ9H3G5 476 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 RIOX1Q9H6W3 641 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 LARSQ9P2J5 1176 aaKnown RBP8.32□□□□□ -1.08
CD46-207ENST00000367041 DNAJB4Q9UDY4 337 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 ZFP69BQ9UJL9 534 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 PTPN22Q9Y2R2 807 aa8.32□□□□□ -1.08
CD46-207ENST00000367041 CDK5RAP2Q96SN8 1893 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 A8MXQ7 604 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 ATP9BO43861 1147 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 ZWINTO95229 277 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 GOLGA8HP0CJ92 632 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 SETSIPP0DME0 302 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 COMTP21964 271 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 KRT17Q04695 432 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 NR1H3Q13133 447 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 DRAP1Q14919 205 aaPredicted RBP8.31□□□□□ -1.08
CD46-207ENST00000367041 SUSD4Q5VX71 490 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 POTEAQ6S8J7 498 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.31□□□□□ -1.08
CD46-207ENST00000367041 LZICQ8WZA0 190 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 POLR3CQ9BUI4 534 aaPredicted RBP8.31□□□□□ -1.08
CD46-207ENST00000367041 METTL5Q9NRN9 209 aaKnown RBP8.31□□□□□ -1.08
CD46-207ENST00000367041 ZDHHC7Q9NXF8 308 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 ASAP1Q9ULH1 1129 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 BTBD19C9JJ37 291 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 F8W8V4 182 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 MAP3K7O43318 606 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 USP17L8P0C7I0 530 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 CCDC166P0CW27 439 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 IGHMBP2P38935 993 aaKnown RBP8.31□□□□□ -1.08
CD46-207ENST00000367041 SESN3P58005 492 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 SFSWAPQ12872 951 aaKnown RBP8.31□□□□□ -1.08
CD46-207ENST00000367041 MTDHQ86UE4 582 aaKnown RBP8.31□□□□□ -1.08
CD46-207ENST00000367041 SKA1Q96BD8 255 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 FAM84BQ96KN1 310 aaPredicted RBP8.31□□□□□ -1.08
CD46-207ENST00000367041 ARHGEF4Q9NR80 690 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 BMP2KQ9NSY1 1161 aaPredicted RBP8.31□□□□□ -1.08
CD46-207ENST00000367041 ARL8BQ9NVJ2 186 aa8.31□□□□□ -1.08
CD46-207ENST00000367041 DOT1LQ8TEK3 1739 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 RASA4BC9J798 803 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 RASA4O43374 803 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 NR3C1P04150 777 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 ALDH1B1P30837 517 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 GRIA2P42262 883 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 ITGA8P53708 1063 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 SH3BGRP55822 239 aaPredicted RBP8.3□□□□□ -1.08
CD46-207ENST00000367041 CACNB1Q02641 598 aaPredicted RBP8.3□□□□□ -1.08
CD46-207ENST00000367041 MAP3K10Q02779 954 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 UBE4AQ14139 1066 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 SPARCL1Q14515 664 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 KRT72Q14CN4 511 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 RASA2Q15283 850 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 SEL1L2Q5TEA6 688 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 RNF207Q6ZRF8 634 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 RINLQ6ZS11 566 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 MARK2Q7KZI7 788 aaKnown RBP8.3□□□□□ -1.08
CD46-207ENST00000367041 FBXO33Q7Z6M2 555 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 GPBP1Q86WP2 473 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 SYCP3Q8IZU3 236 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 NGLY1Q96IV0 654 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 IWS1Q96ST2 819 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 DDX50Q9BQ39 737 aaKnown RBP8.3□□□□□ -1.08
CD46-207ENST00000367041 TUBB6Q9BUF5 446 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 PPP1R12CQ9BZL4 782 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 TYW1Q9NV66 732 aaKnown RBP8.3□□□□□ -1.08
CD46-207ENST00000367041 DNAJC12Q9UKB3 198 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 MTUS1Q9ULD2 1270 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 WASF2Q9Y6W5 498 aa8.3□□□□□ -1.08
CD46-207ENST00000367041 BUD23O43709 281 aaKnown RBP8.3□□□□□ -1.08
CD46-207ENST00000367041 CALUO43852 315 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms