RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 ZCWPW2Q504Y3 356 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 ALKAL1Q6UXT8 129 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 LRRC55Q6ZSA7 311 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 CBWD2Q8IUF1 395 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 CMTR2Q8IYT2 770 aaKnown RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 FIBCD1Q8N539 461 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 SNX27Q96L92 541 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 FAM193BQ96PV7 902 aaPredicted RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 MRPL9Q9BYD2 267 aaKnown RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 RC3H2Q9HBD1 1191 aaKnown RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 TBC1D13Q9NVG8 400 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 RBAKQ9NYW8 714 aaPredicted RBP13.7□□□□□ -0.22
CNTF-201ENST00000361987 DACH1Q9UI36 760 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 FRMD4BQ9Y2L6 1034 aa13.7□□□□□ -0.22
CNTF-201ENST00000361987 SMIM28A0A1B0GU29 152 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 TTC26A0AVF1 554 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 MEFVO15553 781 aaPredicted RBP13.69□□□□□ -0.22
CNTF-201ENST00000361987 THP07101 528 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 DNAJB2P25686 324 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 EDRF1Q3B7T1 1238 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 SLC9A9Q8IVB4 645 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 LRRC43Q8N309 656 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 NKX2-4Q9H2Z4 354 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 PLEKHA5Q9HAU0 1116 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 ANO10Q9NW15 660 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 DMAC2Q9NW81 257 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 HCSTQ9UBK5 93 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 PLAGL2Q9UPG8 496 aa13.69□□□□□ -0.22
CNTF-201ENST00000361987 PTGESO14684 152 aa13.68□□□□□ -0.22
CNTF-201ENST00000361987 CASP4P49662 377 aa13.68□□□□□ -0.22
CNTF-201ENST00000361987 FKBP3Q00688 224 aaKnown RBP13.68□□□□□ -0.22
CNTF-201ENST00000361987 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
CNTF-201ENST00000361987 ZNF280BQ86YH2 543 aa13.68□□□□□ -0.22
CNTF-201ENST00000361987 RSPH1Q8WYR4 309 aa13.68□□□□□ -0.22
CNTF-201ENST00000361987 FBXL18Q96ME1 805 aa13.68□□□□□ -0.22
CNTF-201ENST00000361987 ZMAT2Q96NC0 199 aaKnown RBP13.68□□□□□ -0.22
CNTF-201ENST00000361987 GZF1Q9H116 711 aaPredicted RBP13.68□□□□□ -0.22
CNTF-201ENST00000361987 SLC28A3Q9HAS3 691 aa13.68□□□□□ -0.22
CNTF-201ENST00000361987 CNTN3Q9P232 1028 aa13.68□□□□□ -0.22
CNTF-201ENST00000361987 RWDD2AQ9UIY3 292 aa13.68□□□□□ -0.22
CNTF-201ENST00000361987 MRPL42Q9Y6G3 142 aaKnown RBP13.68□□□□□ -0.22
CNTF-201ENST00000361987 LINC01553A4QN01 128 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 CETN3O15182 167 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 INPPL1O15357 1258 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 ZC3H11AO75152 810 aaKnown RBP eCLIP13.67□□□□□ -0.22
CNTF-201ENST00000361987 DDHD2O94830 711 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 TYRO3Q06418 890 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 GRIK3Q13003 919 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 HSP90AA2PQ14568 343 aaPredicted RBP13.67□□□□□ -0.22
CNTF-201ENST00000361987 STX1AQ16623 288 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 NFIL3Q16649 462 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 XKR4Q5GH76 650 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 PPP2R2DQ66LE6 453 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 TTI2Q6NXR4 508 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 CD302Q8IX05 232 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
CNTF-201ENST00000361987 TMEM174Q8WUU8 243 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 TIFAQ96CG3 184 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 KIF12Q96FN5 646 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 PDE11AQ9HCR9 933 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 MTUS1Q9ULD2 1270 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 AKAP3O75969 853 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 IL18RAPO95256 599 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 ADRB2P07550 413 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 CCDC192P0DO97 292 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 KCNE1P15382 129 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 ALDH7A1P49419 539 aaKnown RBP13.67□□□□□ -0.22
CNTF-201ENST00000361987 POU5F1Q01860 360 aaKnown RBP13.67□□□□□ -0.22
CNTF-201ENST00000361987 JADE1Q6IE81 842 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 BRSK2Q8IWQ3 736 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 CSGALNACT2Q8N6G5 542 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 CCDC127Q96BQ5 260 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 ASB7Q9H672 318 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 CWH43Q9H720 699 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 NRDE2Q9H7Z3 1164 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 DNAJB4Q9UDY4 337 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 TRIP11Q15643 1979 aa13.67□□□□□ -0.22
CNTF-201ENST00000361987 FNDC1Q4ZHG4 1894 aaPredicted RBP13.66□□□□□ -0.22
CNTF-201ENST00000361987 CITO14578 2027 aa13.66□□□□□ -0.22
CNTF-201ENST00000361987 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
CNTF-201ENST00000361987 ALDH2P05091 517 aa13.66□□□□□ -0.22
CNTF-201ENST00000361987 DLATP10515 647 aaKnown RBP13.66□□□□□ -0.22
CNTF-201ENST00000361987 ERCC5P28715 1186 aaPredicted RBP13.66□□□□□ -0.22
CNTF-201ENST00000361987 PSMC2P35998 433 aaKnown RBP13.66□□□□□ -0.22
CNTF-201ENST00000361987 PBX3P40426 434 aa13.66□□□□□ -0.22
CNTF-201ENST00000361987 WNT7BP56706 349 aa13.66□□□□□ -0.22
CNTF-201ENST00000361987 CYP24A1Q07973 514 aa13.66□□□□□ -0.22
CNTF-201ENST00000361987 TPD52L1Q16890 204 aaPredicted RBP13.66□□□□□ -0.22
CNTF-201ENST00000361987 PPP1R10Q96QC0 940 aaKnown RBP13.66□□□□□ -0.22
CNTF-201ENST00000361987 FNBP1Q96RU3 617 aa13.66□□□□□ -0.22
CNTF-201ENST00000361987 DUSP9Q99956 384 aaKnown RBP13.66□□□□□ -0.22
CNTF-201ENST00000361987 SRRTQ9BXP5 876 aaKnown RBP13.66□□□□□ -0.22
CNTF-201ENST00000361987 CERS4Q9HA82 394 aa13.66□□□□□ -0.22
CNTF-201ENST00000361987 SLC38A7Q9NVC3 462 aa13.66□□□□□ -0.22
CNTF-201ENST00000361987 CASTOR2A6NHX0 329 aa13.65□□□□□ -0.22
CNTF-201ENST00000361987 SOX1O00570 391 aaPredicted RBP13.65□□□□□ -0.22
CNTF-201ENST00000361987 NFICP08651 508 aa13.65□□□□□ -0.22
CNTF-201ENST00000361987 TFAMQ00059 246 aaKnown RBP13.65□□□□□ -0.22
CNTF-201ENST00000361987 TAP1Q03518 808 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms