RNA–Protein interactions for RNA: ENST00000360958.6

TPM2-202, Transcript of tropomyosin 2, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene TPM2, Length 1,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-202ENST00000360958 RPN1P04843 607 aaKnown RBP16.29■□□□□ 0.2
TPM2-202ENST00000360958 IGFBP4P22692 258 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 CASP1P29466 404 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 HOXD13P35453 343 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 COL19A1Q14993 1142 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 SLC10A6Q3KNW5 377 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 KMT5BQ4FZB7 885 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 DDX53Q86TM3 631 aaKnown RBP16.29■□□□□ 0.2
TPM2-202ENST00000360958 CD302Q8IX05 232 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 MAFAQ8NHW3 353 aaPredicted RBP16.29■□□□□ 0.2
TPM2-202ENST00000360958 SCFD1Q8WVM8 642 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 CCDC47Q96A33 483 aaKnown RBP16.29■□□□□ 0.2
TPM2-202ENST00000360958 TMEM169Q96HH4 297 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 UROC1Q96N76 676 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 MSTO1Q9BUK6 570 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 ALG13Q9NP73 1137 aaKnown RBP16.29■□□□□ 0.2
TPM2-202ENST00000360958 KLK14Q9P0G3 267 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 HOOK1Q9UJC3 728 aaKnown RBP16.29■□□□□ 0.2
TPM2-202ENST00000360958 CPSF3Q9UKF6 684 aaKnown RBP16.29■□□□□ 0.2
TPM2-202ENST00000360958 FAN1Q9Y2M0 1017 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 PLXNA4Q9HCM2 1894 aa16.29■□□□□ 0.2
TPM2-202ENST00000360958 CITO14578 2027 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 SMIM28A0A1B0GU29 152 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 TMEM189-UBE2V1I3L0A0 370 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 NRP1O14786 923 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 FSCN2O14926 492 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 MEFVO15553 781 aaPredicted RBP16.28■□□□□ 0.2
TPM2-202ENST00000360958 LDHAP00338 332 aaKnown RBP16.28■□□□□ 0.2
TPM2-202ENST00000360958 DNAJB1P25685 340 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 HSP90AA2PQ14568 343 aaPredicted RBP16.28■□□□□ 0.2
TPM2-202ENST00000360958 C12orf56Q8IXR9 622 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 GPR65Q8IYL9 337 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 RNF168Q8IYW5 571 aaPredicted RBP16.28■□□□□ 0.2
TPM2-202ENST00000360958 SYCP3Q8IZU3 236 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 GLIS3Q8NEA6 775 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 HPS3Q969F9 1004 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 GTPBP4Q9BZE4 634 aaKnown RBP16.28■□□□□ 0.2
TPM2-202ENST00000360958 GBP3Q9H0R5 595 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 NSUN3Q9H649 340 aaKnown RBP16.28■□□□□ 0.2
TPM2-202ENST00000360958 NGRNQ9NPE2 291 aaKnown RBP16.28■□□□□ 0.2
TPM2-202ENST00000360958 TLR9Q9NR96 1032 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 AGO2Q9UKV8 859 aaKnown RBP16.28■□□□□ 0.2
TPM2-202ENST00000360958 DERAQ9Y315 318 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 IRAK3Q9Y616 596 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 EYSQ5T1H1 3165 aa16.28■□□□□ 0.2
TPM2-202ENST00000360958 REV3LO60673 3130 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 FSD2A1L4K1 749 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 PRPF6O94906 941 aaKnown RBP16.27■□□□□ 0.2
TPM2-202ENST00000360958 PBX3P40426 434 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 MATR3P43243 847 aaKnown RBP eCLIP16.27■□□□□ 0.2
TPM2-202ENST00000360958 STK4Q13043 487 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 ZBTB6Q15916 424 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 ENOX2Q16206 610 aaKnown RBP16.27■□□□□ 0.2
TPM2-202ENST00000360958 TMEM173Q86WV6 379 aaPredicted RBP16.27■□□□□ 0.2
TPM2-202ENST00000360958 KIAA0895Q8NCT3 520 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 GOLGA5Q8TBA6 731 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 POMGNT1Q8WZA1 660 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 DDX27Q96GQ7 796 aaKnown RBP16.27■□□□□ 0.2
TPM2-202ENST00000360958 GSDMAQ96QA5 445 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 COLEC11Q9BWP8 271 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 ASB7Q9H672 318 aa16.27■□□□□ 0.2
TPM2-202ENST00000360958 PRRC2BQ5JSZ5 2229 aaKnown RBP16.27■□□□□ 0.19
TPM2-202ENST00000360958 ATG2AQ2TAZ0 1938 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 TISP43B9A030 160 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 TGFB1I1O43294 461 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 NCK2O43639 380 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 KINO60870 393 aaKnown RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 GADD45BO75293 160 aaPredicted RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 KIF20AO95235 890 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 PRR29P0C7W0 189 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 CXCL8P10145 99 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 HARSP12081 509 aaKnown RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 CYP3A5P20815 502 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 RPL9P32969 192 aaKnown RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 OSTNP61366 133 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 KNOP1Q1ED39 458 aaKnown RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 COBLL1Q53SF7 1204 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 CRELD2Q6UXH1 353 aaPredicted RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 BCL7CQ8WUZ0 217 aaPredicted RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 PPP2R3CQ969Q6 453 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 FBXL18Q96ME1 805 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 ZMAT2Q96NC0 199 aaKnown RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 CXCL16Q9H2A7 254 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 RPF1Q9H9Y2 349 aaKnown RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 KIAA1586Q9HCI6 787 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 SLC39A2Q9NP94 309 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 RMND1Q9NWS8 449 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 MARCH5Q9NX47 278 aa16.26■□□□□ 0.19
TPM2-202ENST00000360958 PDCD11Q14690 1871 aaKnown RBP16.26■□□□□ 0.19
TPM2-202ENST00000360958 NT5C1B-RDH14C9J2C7 533 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 IL18RAPO95256 599 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 TNFSF9P41273 254 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 OR1G1P47890 313 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 BMS1Q14692 1282 aaKnown RBP16.25■□□□□ 0.19
TPM2-202ENST00000360958 ZBTB41Q5SVQ8 909 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 ARMCX5Q6P1M9 558 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 HS2ST1Q7LGA3 356 aa16.25■□□□□ 0.19
TPM2-202ENST00000360958 NT5DC4Q86YG4 428 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms