RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 SMARCA1P28370 1054 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 CDH6P55285 790 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 SLC12A1Q13621 1099 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 FAM47CQ5HY64 1035 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 VCPKMTQ9H867 229 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 KIAA1210Q9ULL0 1709 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 ANGPTL3Q9Y5C1 460 aa16.51■□□□□ 0.23
TRAPPC11-202ENST00000357207 ENO1P06733 434 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 SCTRP47872 440 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 MRPS35P82673 323 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 MORF4L2Q15014 288 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 ZC2HC1CQ53FD0 456 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 NT5DC1Q5TFE4 455 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 HEATR6Q6AI08 1181 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 CLEC10AQ8IUN9 316 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 CCNYL1Q8N7R7 359 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 DAGLBQ8NCG7 672 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 TMEM117Q9H0C3 514 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 RAVER2Q9HCJ3 691 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 ZHX2Q9Y6X8 837 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 COILP38432 576 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 ITGA8P53708 1063 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 EIF3EP60228 445 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 SWSAP1Q6NVH7 229 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 RYBPQ8N488 228 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 DHX38Q92620 1227 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 SERPINB12Q96P63 405 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 TRPV6Q9H1D0 765 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 MRPL40Q9NQ50 206 aaKnown RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 SLC5A4Q9NY91 659 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 BFARQ9NZS9 450 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 TAC1P20366 129 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 MED21Q13503 144 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 CYFIP1Q7L576 1253 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 RNF103-CHMP3A0A140T963 221 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 MAP2K7O14733 419 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 GRB10Q13322 594 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 ARL13BQ3SXY8 428 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 LMBRD2Q68DH5 695 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 SLC13A5Q86YT5 568 aaPredicted RBP16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 CPA5Q8WXQ8 436 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 KLHL11Q9NVR0 708 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 TRAF3IP3Q9Y228 551 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 INPP5FQ9Y2H2 1132 aa16.5■□□□□ 0.23
TRAPPC11-202ENST00000357207 FLT1P17948 1338 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 ASAP2O43150 1006 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 TFRCP02786 760 aaKnown RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 S100BP04271 92 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 TEDDM1Q5T9Z0 273 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 RIBC1Q8N443 379 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 TEX9Q8N6V9 391 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 NBPF3Q9H094 633 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 PYGBP11216 843 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 DNAJC3Q13217 504 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 PDCD2Q16342 344 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 DNAL1Q4LDG9 190 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 RARS2Q5T160 578 aaKnown RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 FAM102AQ5T9C2 384 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 TMEM154Q6P9G4 183 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 GJB7Q6PEY0 223 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 SH2D3AQ9BRG2 576 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 SEMA6BQ9H3T3 888 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 ADA2Q9NZK5 511 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 NEXMIFQ5QGS0 1516 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 LRRIQ1Q96JM4 1722 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 MCF2P10911 925 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 SSTR3P32745 418 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 ZNF568Q3ZCX4 644 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 PRPF38AQ8NAV1 312 aaKnown RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 FBXO25Q8TCJ0 367 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 NSUN6Q8TEA1 469 aaKnown RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 MTBPQ96DY7 904 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 GCOM2Q9BZD3 368 aaPredicted RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 FAM129AQ9BZQ8 928 aa16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 PPRC1Q5VV67 1664 aaKnown RBP16.49■□□□□ 0.23
TRAPPC11-202ENST00000357207 GSTA4O15217 222 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 NKX1-1Q15270 411 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 KIF19Q2TAC6 998 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 TMEM259Q4ZIN3 620 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 ACTRT1Q8TDG2 376 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 TRIM15Q9C019 465 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 KRT82Q9NSB4 513 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 GTSE1Q9NYZ3 720 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 TRPC5Q9UL62 973 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 M0QYV0 167 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 CHEK2O96017 543 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 KCNA3P22001 575 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 FNTAP49354 379 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 C16orf86Q6ZW13 317 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 PSPC1Q8WXF1 523 aaKnown RBP16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 PPP1R16BQ96T49 567 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 SUN2Q9UH99 717 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 PCDHA10Q9Y5I2 948 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 CUL3Q13618 768 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 SEC23AQ15436 765 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 DUOXA2Q1HG44 320 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 FBXO33Q7Z6M2 555 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 MTMR8Q96EF0 704 aa16.48■□□□□ 0.23
TRAPPC11-202ENST00000357207 MTRQ99707 1265 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms