RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 TUBGCP3Q96CW5 907 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 VCPKMTQ9H867 229 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 CAPN10Q9HC96 672 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 KDM5CP41229 1560 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 CPB1P15086 417 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 PHKA2P46019 1235 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 GPC5P78333 572 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 CC2D2BQ6DHV5 1058 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 KDM7AQ6ZMT4 941 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 PRUNE1Q86TP1 453 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 TBC1D19Q8N5T2 526 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 PPP1R14AQ96A00 147 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 VMP1Q96GC9 406 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 DLGAP2Q9P1A6 1054 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 TCP11X1B4DZS4 312 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 TBC1D4O60343 1298 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 PDE5AO76074 875 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 CALB1P05937 261 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 MAPK6Q16659 721 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 DHX40Q8IX18 779 aaKnown RBP12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 APPL2Q8NEU8 664 aa12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 TOPORSQ9NS56 1045 aaPredicted RBP12.11□□□□□ -0.47
SPTBN1-202ENST00000356805 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 MYBL1P10243 752 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 ERFP50548 548 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 TRIM16LQ309B1 348 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 CHAMP1Q96JM3 812 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 MLH3Q9UHC1 1453 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 ADGRA2Q96PE1 1338 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 O00370 1275 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 PSMD14O00487 310 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 ZNF235Q14590 738 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 MFSD4BQ5TF39 518 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 C16orf89Q6UX73 402 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 NUDT18Q6ZVK8 323 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 GOLPH3LQ9H4A5 285 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 ATP9BO43861 1147 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 NCALDP61601 193 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 GFPT1Q06210 699 aaPredicted RBP12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 NYAP1Q6ZVC0 841 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 FGD2Q7Z6J4 655 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 DCLRE1BQ9H816 532 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 UTP6Q9NYH9 597 aaKnown RBP12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 HSPBP1Q9NZL4 362 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 PVALEFA0A1B0GWK0 134 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 GNA15P30679 374 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 RNF25Q96BH1 459 aaPredicted RBP12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 SLC16A1P53985 500 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 DSG1Q02413 1049 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 ARID5BQ14865 1188 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 INAQ16352 499 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 KIZQ2M2Z5 673 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 GSPT2Q8IYD1 628 aaKnown RBP12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 AGBL1Q96MI9 1066 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 TMEM245Q9H330 911 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 FAM47DPA6NHR8 397 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 DDHD2O94830 711 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 PDE8BO95263 885 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 H2AFXP16104 143 aaPredicted RBP12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 DALRD3Q5D0E6 543 aaKnown RBP12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 E4F1Q66K89 784 aaPredicted RBP12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 PGBD4Q96DM1 585 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 WDR24Q96S15 920 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 CNGB3Q9NQW8 809 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 STMN3Q9NZ72 180 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 ANGPT2O15123 496 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 STAG2Q8N3U4 1231 aa12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
SPTBN1-202ENST00000356805 SSU72P8A0A1W2PR75 194 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 KCNQ3O43525 872 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 CCDC157Q569K6 752 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 IYDQ6PHW0 289 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 CLEC4FQ8N1N0 589 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 CYP2D7A0A087X1C5 515 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 SPAG6O75602 509 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 PTGISQ16647 500 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 EFHC2Q5JST6 749 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 INPP5DQ92835 1189 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 DNAJC12Q9UKB3 198 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 AKT1P31749 480 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 GCLMP48507 274 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 NLRP11P59045 1033 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 CCZ1BP86790 482 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 CCZ1P86791 482 aaPredicted RBP12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 ZCWPW2Q504Y3 356 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 ZBED8Q8IZ13 594 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 BHMT2Q9H2M3 363 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 JAK3P52333 1124 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 PSMC5P62195 406 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 PDAP1Q13442 181 aaKnown RBP12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 PIK3R5Q8WYR1 880 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 FOPNLQ96NB1 174 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 GOLGA8TH3BQL2 631 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 SH2B2O14492 632 aaPredicted RBP12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 RASSF9O75901 435 aa12.09□□□□□ -0.47
SPTBN1-202ENST00000356805 APOA4P06727 396 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms