RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 AXLP30530 894 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 ZBED6P86452 979 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 FAM26DQ5JW98 314 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 KLHDC7AQ5VTJ3 777 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 SLC27A1Q6PCB7 646 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 SV2AQ7L0J3 742 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 OR8K1Q8NGG5 319 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 U2AF1L4Q8WU68 220 aaKnown RBP19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 BAP1Q92560 729 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 FNBP1Q96RU3 617 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 CGRRF1Q99675 332 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 INTS2Q9H0H0 1204 aaKnown RBP19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 SPTLC3Q9NUV7 552 aa19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 PIN4Q9Y237 131 aaKnown RBP19.66■□□□□ 0.74
SMARCD3-202ENST00000356800 SGPL1O95470 568 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 NPTXRO95502 500 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 CLTAP09496 248 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 CXCL8P10145 99 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 NCBP1Q09161 790 aaKnown RBP19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 DCAF4L1Q3SXM0 396 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 KRT39Q6A163 491 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 EHBP1Q8NDI1 1231 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 ZNF397Q8NF99 534 aaPredicted RBP19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 SEMA4DQ92854 862 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 ADPGKQ9BRR6 497 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 CEP72Q9P209 647 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 AJAP1Q9UKB5 411 aaPredicted RBP19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 COQ4Q9Y3A0 265 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 RALGAPA2Q2PPJ7 1873 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 C4BPAP04003 597 aaKnown RBP19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 TNNI1P19237 187 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 POLR2FP61218 127 aaKnown RBP19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 UBXN11Q5T124 520 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 ZNF618Q5T7W0 954 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 TRAF7Q6Q0C0 670 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 OR5B17Q8NGF7 314 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 TAS1R2Q8TE23 839 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 AGO3Q9H9G7 860 aaKnown RBP19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 RPF1Q9H9Y2 349 aaKnown RBP19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 NLRC4Q9NPP4 1024 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 ST3GAL5Q9UNP4 418 aa19.65■□□□□ 0.74
SMARCD3-202ENST00000356800 RPS6KA5O75582 802 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 TFRCP02786 760 aaKnown RBP19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 CKBP12277 381 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 UCHL3P15374 230 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 CLCN1P35523 988 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 GRM5P41594 1212 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 ZACNQ401N2 412 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 FBXO47Q5MNV8 452 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 TDRD10Q5VZ19 366 aaKnown RBP19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 GJB7Q6PEY0 223 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 FAM126BQ8IXS8 530 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 FAM212AQ96EL1 285 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 SEZ6LQ9BYH1 1024 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 FHOD1Q9Y613 1164 aa19.64■□□□□ 0.73
SMARCD3-202ENST00000356800 CAND2O75155 1236 aa19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 CD4P01730 458 aa19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 POU5F1Q01860 360 aaKnown RBP19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 LPIN1Q14693 890 aa19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 KYAT1Q16773 422 aa19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 SLC10A6Q3KNW5 377 aa19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 E4F1Q66K89 784 aaPredicted RBP19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 TMTC1Q8IUR5 882 aa19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 WDR49Q8IV35 697 aa19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 EFCAB13Q8IY85 973 aa19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 C17orf53Q8N3J3 647 aaPredicted RBP19.63■□□□□ 0.73
SMARCD3-202ENST00000356800 LACTBL1A8MY62 500 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 VNN1O95497 513 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 HNRNPH3P31942 346 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 CETN1Q12798 172 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 SURF1Q15526 300 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 MEA1Q16626 185 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 TSR1Q2NL82 804 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 SCARA3Q6AZY7 606 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 IQCEQ6IPM2 695 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 PDXDC1Q6P996 788 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 WDR59Q6PJI9 974 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 RRAGAQ7L523 313 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 FBXL13Q8NEE6 735 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 ERVK-5Q9HDB9 667 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 FBXL5Q9UKA1 691 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 HES2Q9Y543 173 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 MROH7Q68CQ1 1323 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 PDCD11Q14690 1871 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 LRRC53A6NM62 1247 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 IL18RAPO95256 599 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 GHRP10912 638 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 NFX1Q12986 1120 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 PHLDB3Q6NSJ2 640 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 CYP26C1Q6V0L0 522 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 CACNA2D4Q7Z3S7 1137 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 APBB1IPQ7Z5R6 666 aaPredicted RBP19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 DIS3LQ8TF46 1054 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 NXF3Q9H4D5 531 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 SNTG2Q9NY99 539 aa19.62■□□□□ 0.73
SMARCD3-202ENST00000356800 CD52P31358 61 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 MBTPS1Q14703 1052 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 ARHGEF19Q8IW93 802 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 ELMO3Q96BJ8 720 aa19.61■□□□□ 0.73
SMARCD3-202ENST00000356800 ACAP3Q96P50 834 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms