RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 FAM171A1Q5VUB5 890 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 CCDC105Q8IYK2 499 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 DAW1Q8N136 415 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 ST13P5Q8NFI4 369 aaPredicted RBP17.5■□□□□ 0.39
PDGFA-201ENST00000354513 PPP1R10Q96QC0 940 aaKnown RBP17.5■□□□□ 0.39
PDGFA-201ENST00000354513 DPP7Q9UHL4 492 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 TSC2P49815 1807 aa17.5■□□□□ 0.39
PDGFA-201ENST00000354513 THP07101 528 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 LAMP2P13473 410 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 LIG1P18858 919 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 MUTP22033 750 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 GLRA4Q5JXX5 417 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 RSPO2Q6UXX9 243 aaPredicted RBP17.49■□□□□ 0.39
PDGFA-201ENST00000354513 TAS1R3Q7RTX0 852 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 CEP120Q8N960 986 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 C3orf58Q8NDZ4 430 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 DEPTORQ8TB45 409 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 STAMQ92783 540 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 TTPALQ9BTX7 342 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 BHMT2Q9H2M3 363 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 GDAQ9Y2T3 454 aa17.49■□□□□ 0.39
PDGFA-201ENST00000354513 TMEM189-UBE2V1I3L0A0 370 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 SRFP11831 508 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 CCT6AP40227 531 aaKnown RBP17.48■□□□□ 0.39
PDGFA-201ENST00000354513 CREMQ03060 361 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 IL17AQ16552 155 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 ELMSAN1Q6PJG2 1045 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 FRMD5Q7Z6J6 570 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 IGSF22Q8N9C0 903 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 ERMNQ8TAM6 284 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 RPP25Q9BUL9 199 aaKnown RBP17.48■□□□□ 0.39
PDGFA-201ENST00000354513 PIDD1Q9HB75 910 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 GOLGA2P5Q9HBQ8 144 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 WNT16Q9UBV4 365 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 FBXL21Q9UKT6 434 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 DCHS1Q96JQ0 3298 aa17.48■□□□□ 0.39
PDGFA-201ENST00000354513 PP2D1A8MPX8 630 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 ABLIM1O14639 778 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 MEFVO15553 781 aaPredicted RBP17.47■□□□□ 0.39
PDGFA-201ENST00000354513 FGFR3P22607 806 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 SOX4Q06945 474 aaPredicted RBP17.47■□□□□ 0.39
PDGFA-201ENST00000354513 MAPK7Q13164 816 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 DCAF4L1Q3SXM0 396 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 ATF7IP2Q5U623 682 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 HAUS3Q68CZ6 603 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 KCNK18Q7Z418 384 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 GRASPQ7Z6J2 395 aaPredicted RBP17.47■□□□□ 0.39
PDGFA-201ENST00000354513 CEP57Q86XR8 500 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 DTWD2Q8NBA8 298 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 GPR152Q8TDT2 470 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 DDX19AQ9NUU7 478 aaKnown RBP17.47■□□□□ 0.39
PDGFA-201ENST00000354513 CA14Q9ULX7 337 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 KIAA1024Q9UPX6 916 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 PCDHB6Q9Y5E3 794 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 NUMBLQ9Y6R0 609 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 E9PMD0 336 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 C8AP07357 584 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 U2AF2P26368 475 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDGFA-201ENST00000354513 TRAPPC10P48553 1259 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 CLCNKBP51801 687 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 PPP2R5AQ15172 486 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 XKR4Q5GH76 650 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 POTEHQ6S545 545 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.47■□□□□ 0.39
PDGFA-201ENST00000354513 FGF14Q92915 247 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 NXPE3Q969Y0 559 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 DDX27Q96GQ7 796 aaKnown RBP17.47■□□□□ 0.39
PDGFA-201ENST00000354513 ADPGKQ9BRR6 497 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 MMTAG2Q9BU76 263 aaKnown RBP17.47■□□□□ 0.39
PDGFA-201ENST00000354513 CDT1Q9H211 546 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 PTPRHQ9HD43 1115 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDGFA-201ENST00000354513 DLGAP2Q9P1A6 1054 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 MTRRQ9UBK8 725 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 LRWD1Q9UFC0 647 aa17.47■□□□□ 0.39
PDGFA-201ENST00000354513 PHLPP2Q6ZVD8 1323 aa17.46■□□□□ 0.39
PDGFA-201ENST00000354513 I3L4J1 428 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 CCL16O15467 120 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 HNRNPA1P09651 372 aaKnown RBP eCLIP17.46■□□□□ 0.38
PDGFA-201ENST00000354513 FSHRP23945 695 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 TKTP29401 623 aaKnown RBP17.46■□□□□ 0.38
PDGFA-201ENST00000354513 HOXA9P31269 272 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 RBM25P49756 843 aaKnown RBP17.46■□□□□ 0.38
PDGFA-201ENST00000354513 HMGN5P82970 282 aaKnown RBP17.46■□□□□ 0.38
PDGFA-201ENST00000354513 PTGDRQ13258 359 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 RAB33AQ14088 237 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 ANGPT1Q15389 498 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 UPP1Q16831 310 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 TMEM132AQ24JP5 1023 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 ALKAL1Q6UXT8 129 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 ITFG1Q8TB96 612 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 SNX29Q8TEQ0 813 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 KIFAP3Q92845 792 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 ACO2Q99798 780 aaKnown RBP17.46■□□□□ 0.38
PDGFA-201ENST00000354513 RTP3Q9BQQ7 232 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 RUSC1Q9BVN2 902 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 TBC1D17Q9HA65 648 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 SLC2A4RGQ9NR83 387 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 HCFC1R1Q9NWW0 138 aa17.46■□□□□ 0.38
PDGFA-201ENST00000354513 TNFSF13BQ9Y275 285 aa17.46■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms