RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SPATA2LQ8IUW3 424 aaPredicted RBP14.57□□□□□ -0.08
SMC6-201ENST00000351948 HPDLQ96IR7 371 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 RBM41Q96IZ5 413 aaKnown RBP14.57□□□□□ -0.08
SMC6-201ENST00000351948 PNMA5Q96PV4 448 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 TMEM8AQ9HCN3 771 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 ABCF3Q9NUQ8 709 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 HSPA6P17066 643 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 SLC18A3Q16572 532 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 E4F1Q66K89 784 aaPredicted RBP14.57□□□□□ -0.08
SMC6-201ENST00000351948 FBXL16Q8N461 479 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 MS4A14Q96JA4 679 aa14.57□□□□□ -0.08
SMC6-201ENST00000351948 GSTA1P08263 222 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 GSTA2P09210 222 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 GTF2H1P32780 548 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 TTC30AQ86WT1 665 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 SEPT5Q99719 369 aaPredicted RBP14.56□□□□□ -0.08
SMC6-201ENST00000351948 SENP7Q9BQF6 1050 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 NUMBP49757 651 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 CLCN6P51797 869 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 CCZ1BP86790 482 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 CCZ1P86791 482 aaPredicted RBP14.56□□□□□ -0.08
SMC6-201ENST00000351948 ANKRD20A3Q5VUR7 823 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 KDELC2Q7Z4H8 507 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 SLC35G2Q8TBE7 412 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 RUNDC3BQ96NL0 473 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 MCEEQ96PE7 176 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 CDC42EP1Q00587 391 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 DNERQ8NFT8 737 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 IL31RAQ8NI17 732 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 MRIQ9BWK5 157 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 MAP3K20Q9NYL2 800 aaKnown RBP14.56□□□□□ -0.08
SMC6-201ENST00000351948 SYNGAP1Q96PV0 1343 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 KIAA0391O15091 583 aaKnown RBP14.56□□□□□ -0.08
SMC6-201ENST00000351948 B3GAT3O94766 335 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 PDGFRAP16234 1089 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 RARRES1P49788 294 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 BCAR1P56945 870 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 KLHDC7AQ5VTJ3 777 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 CATSPERGQ6ZRH7 1159 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 DNAAF5Q86Y56 855 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 C10orf67Q8IYJ2 551 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 PDIK1LQ8N165 341 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 GANCQ8TET4 914 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 PGBD4Q96DM1 585 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 IP6K2Q9UHH9 426 aa14.56□□□□□ -0.08
SMC6-201ENST00000351948 AKAP3O75969 853 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 MSH2P43246 934 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 TREML2Q5T2D2 321 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 GPAT2Q6NUI2 795 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 SDCCAG8Q86SQ7 713 aaPredicted RBP14.55□□□□□ -0.08
SMC6-201ENST00000351948 PYROXD1Q8WU10 500 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 TMEM117Q9H0C3 514 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 TRPC7Q9HCX4 862 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 SAYSD1Q9NPB0 183 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 PARVAQ9NVD7 372 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 EXOC1LA0A1B0GW35 172 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 MANSC4A6NHS7 340 aaPredicted RBP14.55□□□□□ -0.08
SMC6-201ENST00000351948 GBP1P32455 592 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 CYP4A22Q5TCH4 519 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 LRRC31Q6UY01 552 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 ZNF720Q7Z2F6 126 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 DNAJB3Q8WWF6 145 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 MKL1Q969V6 931 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 RANBP17Q9H2T7 1088 aaKnown RBP14.55□□□□□ -0.08
SMC6-201ENST00000351948 UBN1Q9NPG3 1134 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 KNDC1Q76NI1 1749 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 WDR91A4D1P6 747 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 AP1B1Q10567 949 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 GKAP1Q5VSY0 366 aaPredicted RBP14.55□□□□□ -0.08
SMC6-201ENST00000351948 FBXO38Q6PIJ6 1188 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 ANKRD26Q9UPS8 1709 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 TRAPPC3O43617 180 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 RTN2O75298 545 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 TFDP2Q14188 446 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 TMEM132BQ14DG7 1078 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 PSMD6Q15008 389 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 PLCB4Q15147 1175 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 KYAT1Q16773 422 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 SPOPLQ6IQ16 392 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 C4orf19Q8IY42 314 aa14.55□□□□□ -0.08
SMC6-201ENST00000351948 ROBO1Q9Y6N7 1651 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 MEIS2O14770 477 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 CLTAP09496 248 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 LAMTOR4Q0VGL1 99 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 MTM1Q13496 603 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 TTI2Q6NXR4 508 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 DEFB128Q7Z7B8 93 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 TRIM59Q8IWR1 403 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 RHOT1Q8IXI2 618 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 ELMOD1Q8N336 334 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 KIAA0895Q8NCT3 520 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 L3MBTL3Q96JM7 780 aaPredicted RBP14.54□□□□□ -0.08
SMC6-201ENST00000351948 NOC2LQ9Y3T9 749 aaKnown RBP14.54□□□□□ -0.08
SMC6-201ENST00000351948 STK25O00506 426 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 APBA1Q02410 837 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 EFHC2Q5JST6 749 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 NT5C1AQ9BXI3 368 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 NIF3L1Q9GZT8 377 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 TISP43B9A030 160 aa14.54□□□□□ -0.08
SMC6-201ENST00000351948 FOXN3O00409 490 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms