RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NLGN1Q8N2Q7 840 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 AMNQ9BXJ7 453 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 PCDHB13Q9Y5F0 798 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 LMNB1P20700 586 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 ZNF568Q3ZCX4 644 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 OR52E8Q6IFG1 317 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 TRMT10CQ7L0Y3 403 aaKnown RBP19.92■□□□□ 0.78
SCARF1-202ENST00000348987 KSR1Q8IVT5 923 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 NAP1L4Q99733 375 aaKnown RBP19.92■□□□□ 0.78
SCARF1-202ENST00000348987 PAIP2Q9BPZ3 127 aaKnown RBP19.92■□□□□ 0.78
SCARF1-202ENST00000348987 GORASP1Q9BQQ3 440 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 DENND2DQ9H6A0 471 aaPredicted RBP19.92■□□□□ 0.78
SCARF1-202ENST00000348987 NYAP2Q9P242 653 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 SYNGAP1Q96PV0 1343 aa19.92■□□□□ 0.78
SCARF1-202ENST00000348987 GCNT3O95395 438 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 ATP5DP30049 168 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 POLGP54098 1239 aaPredicted RBP19.91■□□□□ 0.78
SCARF1-202ENST00000348987 APLFQ8IW19 511 aaPredicted RBP19.91■□□□□ 0.78
SCARF1-202ENST00000348987 RBBP8NLQ8NC74 664 aaPredicted RBP19.91■□□□□ 0.78
SCARF1-202ENST00000348987 B4GALNT2Q8NHY0 566 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 DCAF4Q8WV16 495 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 FAM136AQ96C01 138 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 SLC7A6OSQ96CW6 309 aaPredicted RBP19.91■□□□□ 0.78
SCARF1-202ENST00000348987 ZDHHC15Q96MV8 337 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 LRRC37BQ96QE4 947 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 AAASQ9NRG9 546 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 VAV3Q9UKW4 847 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 GREB1LQ9C091 1923 aaPredicted RBP19.91■□□□□ 0.78
SCARF1-202ENST00000348987 NR3C1P04150 777 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 ALAS1P13196 640 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 AP3B2Q13367 1082 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 APBB1IPQ7Z5R6 666 aaPredicted RBP19.91■□□□□ 0.78
SCARF1-202ENST00000348987 FBXO11Q86XK2 927 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 SRRM1Q8IYB3 904 aaKnown RBP19.91■□□□□ 0.78
SCARF1-202ENST00000348987 KIFAP3Q92845 792 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 SLC35C1Q96A29 364 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 AKT1S1Q96B36 256 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 VCXQ9H320 206 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 PI4KBQ9UBF8 816 aa19.91■□□□□ 0.78
SCARF1-202ENST00000348987 ATP5HO75947 161 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 T-ENOLP0DO92 83 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 CHKAP35790 457 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 CALCOCO2Q13137 446 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 LLGL1Q15334 1064 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 CLUL1Q15846 466 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 FOXB2Q5VYV0 432 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 ARHGEF18Q6ZSZ5 1173 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 BORCS6Q96GS4 357 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 PPP1R12CQ9BZL4 782 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 NMRK1Q9NWW6 199 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 CHORDC1Q9UHD1 332 aaPredicted RBP19.9■□□□□ 0.78
SCARF1-202ENST00000348987 LRRC37AA6NMS7 1700 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 CBX6O95503 412 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 SOX5P35711 763 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 SREBF1P36956 1147 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 COILP38432 576 aaPredicted RBP19.9■□□□□ 0.78
SCARF1-202ENST00000348987 KYNUQ16719 465 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 Q4G0T1 1027 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 ZC2HC1CQ53FD0 456 aaPredicted RBP19.9■□□□□ 0.78
SCARF1-202ENST00000348987 ZC3H12AQ5D1E8 599 aaKnown RBP19.9■□□□□ 0.78
SCARF1-202ENST00000348987 C10orf71Q711Q0 1435 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 RPUSD2Q8IZ73 545 aaKnown RBP19.9■□□□□ 0.78
SCARF1-202ENST00000348987 GRAMD1AQ96CP6 724 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 GLT8D2Q9H1C3 349 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 PCMTD2Q9NV79 361 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 NKIRAS1Q9NYS0 192 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 SH3BP1Q9Y3L3 701 aa19.9■□□□□ 0.78
SCARF1-202ENST00000348987 A0A1W2PRG0 241 aa19.89■□□□□ 0.78
SCARF1-202ENST00000348987 CETPP11597 493 aa19.89■□□□□ 0.78
SCARF1-202ENST00000348987 MOXD1Q6UVY6 613 aa19.89■□□□□ 0.78
SCARF1-202ENST00000348987 INPP5DQ92835 1189 aa19.89■□□□□ 0.78
SCARF1-202ENST00000348987 LBHD1Q9BQE6 289 aaPredicted RBP19.89■□□□□ 0.78
SCARF1-202ENST00000348987 EIF2AK1Q9BQI3 630 aaKnown RBP19.89■□□□□ 0.78
SCARF1-202ENST00000348987 PDXKO00764 312 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 TP73O15350 636 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 NVLO15381 856 aaKnown RBP19.89■□□□□ 0.77
SCARF1-202ENST00000348987 TGFB1I1O43294 461 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 CHMP2AO43633 222 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 NMT1P30419 496 aaKnown RBP19.89■□□□□ 0.77
SCARF1-202ENST00000348987 YARSP54577 528 aaKnown RBP19.89■□□□□ 0.77
SCARF1-202ENST00000348987 COG2Q14746 738 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 DRAP1Q14919 205 aaPredicted RBP19.89■□□□□ 0.77
SCARF1-202ENST00000348987 CYFIP1Q7L576 1253 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 UBL4BQ8N7F7 174 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 ERMNQ8TAM6 284 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 SPOCK2Q92563 424 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 ZNF333Q96JL9 665 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 PASKQ96RG2 1323 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 GH2P01242 217 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 PYGMP11217 842 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 HSPA6P17066 643 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 UBXN2AP68543 259 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 STRN3Q13033 797 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 DNAJC3Q13217 504 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 RCN2Q14257 317 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 IFT43Q96FT9 208 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 MASTLQ96GX5 879 aa19.89■□□□□ 0.77
SCARF1-202ENST00000348987 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.89■□□□□ 0.77
SCARF1-202ENST00000348987 SIPA1L1O43166 1804 aa19.88■□□□□ 0.77
SCARF1-202ENST00000348987 KIF13BQ9NQT8 1826 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms